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Cluster: B15.bin_8_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B15_contig_1142 B15_contig_1142_265 313607 315961 - GH3
TC B15_contig_1142 B15_contig_1142_266 316164 317438 - 2.A.1.2.93
STP B15_contig_1142 B15_contig_1142_267 317670 318374 + TetR_N
pfam B15_contig_1142 B15_contig_1142_268 318639 320228 + Cellulase | Apiosidase | DUF5060 | DUF5605
TC B15_contig_1142 B15_contig_1142_269 320307 321674 + 2.A.2.3.2
TF B15_contig_1142 B15_contig_1142_270 321863 322441 + MarR
TC B15_contig_1142 B15_contig_1142_271 322513 323967 + 2.A.1.3.30
Gene ID: B15_contig_1142_265
Type: CAZyme
Location: 313607 - 315961 (-)
Gene ID: B15_contig_1142_266
Type: TC
Location: 316164 - 317438 (-)
Gene ID: B15_contig_1142_267
Type: STP
Location: 317670 - 318374 (+)
Gene ID: B15_contig_1142_268
Type: pfam
Location: 318639 - 320228 (+)
Gene ID: B15_contig_1142_269
Type: TC
Location: 320307 - 321674 (+)
Gene ID: B15_contig_1142_270
Type: TF
Location: 321863 - 322441 (+)
Gene ID: B15_contig_1142_271
Type: TC
Location: 322513 - 323967 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
B15_contig_1142_266 vegetarian > vegan 1.66993 0.01497
B15_contig_1142_270 vegetarian > vegan 1.81483 0.04220

🧭 Explore Read Mapping of CGC

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