Cluster: B15.bin_8_CGC4
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 6
- Substrate:
- Genome ID: B15.bin_8
- CGC Family ID: CGCFAM_01130
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1142 | B15_contig_1142_254 | 296799 | 298925 | + | GH42 |
| STP | B15_contig_1142 | B15_contig_1142_255 | 298998 | 299624 | - | TetR_N |
| TC | B15_contig_1142 | B15_contig_1142_256 | 299952 | 301277 | + | 2.A.1.2.93 |
| CAZyme | B15_contig_1142 | B15_contig_1142_257 | 301547 | 302893 | + | GH30_2 |
| CAZyme | B15_contig_1142 | B15_contig_1142_258 | 303079 | 304242 | + | GH5_44 |
| CAZyme | B15_contig_1142 | B15_contig_1142_259 | 304404 | 305612 | + | GH5_44 |
| CAZyme | B15_contig_1142 | B15_contig_1142_260 | 305642 | 307288 | + | CBM91 | GH43_11 |
| CAZyme | B15_contig_1142 | B15_contig_1142_261 | 307380 | 310304 | - | GH3 |
Gene ID: B15_contig_1142_254
Type: CAZyme
Location: 296799 - 298925 (+)
Type: CAZyme
Location: 296799 - 298925 (+)
Gene ID: B15_contig_1142_255
Type: STP
Location: 298998 - 299624 (-)
Type: STP
Location: 298998 - 299624 (-)
Gene ID: B15_contig_1142_256
Type: TC
Location: 299952 - 301277 (+)
Type: TC
Location: 299952 - 301277 (+)
Gene ID: B15_contig_1142_257
Type: CAZyme
Location: 301547 - 302893 (+)
Type: CAZyme
Location: 301547 - 302893 (+)
Gene ID: B15_contig_1142_258
Type: CAZyme
Location: 303079 - 304242 (+)
Type: CAZyme
Location: 303079 - 304242 (+)
Gene ID: B15_contig_1142_259
Type: CAZyme
Location: 304404 - 305612 (+)
Type: CAZyme
Location: 304404 - 305612 (+)
Gene ID: B15_contig_1142_260
Type: CAZyme
Location: 305642 - 307288 (+)
Type: CAZyme
Location: 305642 - 307288 (+)
Gene ID: B15_contig_1142_261
Type: CAZyme
Location: 307380 - 310304 (-)
Type: CAZyme
Location: 307380 - 310304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.