Cluster: B15.bin_8_CGC39
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1144 | B15_contig_1144_453 | 622093 | 622641 | - | 3.A.7.19.1 |
| pfam | B15_contig_1144 | B15_contig_1144_454 | 622948 | 624198 | - | SLFN_AlbA_2 |
| NULL(UNKNOWN) | B15_contig_1144 | B15_contig_1144_455 | 625522 | 625863 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B15_contig_1144 | B15_contig_1144_456 | 626035 | 627288 | + | CE9 |
| TC | B15_contig_1144 | B15_contig_1144_457 | 627389 | 628234 | - | 3.A.1.2.24 |
| TF | B15_contig_1144 | B15_contig_1144_458 | 628258 | 629397 | - | MarR |
| TC | B15_contig_1144 | B15_contig_1144_459 | 629688 | 630845 | + | 3.A.1.2.22 |
| TC | B15_contig_1144 | B15_contig_1144_460 | 630926 | 632482 | + | 3.A.1.2.22 |
| TC | B15_contig_1144 | B15_contig_1144_461 | 632479 | 633699 | + | 3.A.1.2.22 |
Gene ID: B15_contig_1144_453
Type: TC
Location: 622093 - 622641 (-)
Type: TC
Location: 622093 - 622641 (-)
Gene ID: B15_contig_1144_454
Type: pfam
Location: 622948 - 624198 (-)
Type: pfam
Location: 622948 - 624198 (-)
Gene ID: B15_contig_1144_455
Type:
Location: 625522 - 625863 (+)
Type:
Location: 625522 - 625863 (+)
Gene ID: B15_contig_1144_456
Type: CAZyme
Location: 626035 - 627288 (+)
Type: CAZyme
Location: 626035 - 627288 (+)
Gene ID: B15_contig_1144_457
Type: TC
Location: 627389 - 628234 (-)
Type: TC
Location: 627389 - 628234 (-)
Gene ID: B15_contig_1144_458
Type: TF
Location: 628258 - 629397 (-)
Type: TF
Location: 628258 - 629397 (-)
Gene ID: B15_contig_1144_459
Type: TC
Location: 629688 - 630845 (+)
Type: TC
Location: 629688 - 630845 (+)
Gene ID: B15_contig_1144_460
Type: TC
Location: 630926 - 632482 (+)
Type: TC
Location: 630926 - 632482 (+)
Gene ID: B15_contig_1144_461
Type: TC
Location: 632479 - 633699 (+)
Type: TC
Location: 632479 - 633699 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B15_contig_1144_453 | vegan > omnivore | 11.72050 | 0.00918 |
| B15_contig_1144_453 | vegetarian > omnivore | 14.32257 | 0.02538 |
| B15_contig_1144_453 | vegetarian > vegan | 2.60208 | 0.04220 |
| B15_contig_1144_461 | vegan > omnivore | 1.46093 | 0.00918 |
| B15_contig_1144_461 | vegetarian > omnivore | 1.43422 | 0.02538 |