Cluster: B15.bin_8_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: B15.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1142 | B15_contig_1142_205 | 226429 | 229335 | + | 3.A.3.5.4 |
| TC | B15_contig_1142 | B15_contig_1142_206 | 229605 | 230840 | + | 2.A.1.17.3 |
| TF | B15_contig_1142 | B15_contig_1142_207 | 230908 | 231627 | + | LytTR |
| pfam | B15_contig_1142 | B15_contig_1142_208 | 231662 | 233089 | + | HATPase_c_5 |
| CAZyme | B15_contig_1142 | B15_contig_1142_209 | 233198 | 234766 | + | GH43_35 |
| NULL(UNKNOWN) | B15_contig_1142 | B15_contig_1142_210 | 234766 | 235389 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B15_contig_1142 | B15_contig_1142_211 | 235418 | 238612 | + | GH3 |
Gene ID: B15_contig_1142_205
Type: TC
Location: 226429 - 229335 (+)
Type: TC
Location: 226429 - 229335 (+)
Gene ID: B15_contig_1142_206
Type: TC
Location: 229605 - 230840 (+)
Type: TC
Location: 229605 - 230840 (+)
Gene ID: B15_contig_1142_207
Type: TF
Location: 230908 - 231627 (+)
Type: TF
Location: 230908 - 231627 (+)
Gene ID: B15_contig_1142_208
Type: pfam
Location: 231662 - 233089 (+)
Type: pfam
Location: 231662 - 233089 (+)
Gene ID: B15_contig_1142_209
Type: CAZyme
Location: 233198 - 234766 (+)
Type: CAZyme
Location: 233198 - 234766 (+)
Gene ID: B15_contig_1142_210
Type:
Location: 234766 - 235389 (+)
Type:
Location: 234766 - 235389 (+)
Gene ID: B15_contig_1142_211
Type: CAZyme
Location: 235418 - 238612 (+)
Type: CAZyme
Location: 235418 - 238612 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.