Cluster: B15.bin_8_CGC29
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.bin_8
- CGC Family ID: CGCFAM_07447
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1144 | B15_contig_1144_99 | 132028 | 134265 | + | 9.B.74.1.1 |
| STP | B15_contig_1144 | B15_contig_1144_100 | 134265 | 134930 | + | TetR_N |
| pfam | B15_contig_1144 | B15_contig_1144_101 | 135029 | 135586 | - | FMN_bind |
| TC | B15_contig_1144 | B15_contig_1144_102 | 135615 | 136427 | - | 3.A.1.122.8 |
| TC | B15_contig_1144 | B15_contig_1144_103 | 136430 | 137776 | - | 3.A.1.122.8 |
| TC | B15_contig_1144 | B15_contig_1144_104 | 137766 | 139109 | - | 3.A.1.122.8 |
| pfam | B15_contig_1144 | B15_contig_1144_105 | 139131 | 140402 | - | FtrD-like |
| TC | B15_contig_1144 | B15_contig_1144_106 | 140487 | 141149 | - | 2.A.108.2.10 |
| TC | B15_contig_1144 | B15_contig_1144_107 | 141181 | 142926 | - | 2.A.108.2.11 |
| TC | B15_contig_1144 | B15_contig_1144_108 | 143260 | 144576 | - | 2.A.1.2.93 |
| CAZyme | B15_contig_1144 | B15_contig_1144_109 | 144663 | 147326 | - | CBM67 | GH78 |
Gene ID: B15_contig_1144_99
Type: TC
Location: 132028 - 134265 (+)
Type: TC
Location: 132028 - 134265 (+)
Gene ID: B15_contig_1144_100
Type: STP
Location: 134265 - 134930 (+)
Type: STP
Location: 134265 - 134930 (+)
Gene ID: B15_contig_1144_101
Type: pfam
Location: 135029 - 135586 (-)
Type: pfam
Location: 135029 - 135586 (-)
Gene ID: B15_contig_1144_102
Type: TC
Location: 135615 - 136427 (-)
Type: TC
Location: 135615 - 136427 (-)
Gene ID: B15_contig_1144_103
Type: TC
Location: 136430 - 137776 (-)
Type: TC
Location: 136430 - 137776 (-)
Gene ID: B15_contig_1144_104
Type: TC
Location: 137766 - 139109 (-)
Type: TC
Location: 137766 - 139109 (-)
Gene ID: B15_contig_1144_105
Type: pfam
Location: 139131 - 140402 (-)
Type: pfam
Location: 139131 - 140402 (-)
Gene ID: B15_contig_1144_106
Type: TC
Location: 140487 - 141149 (-)
Type: TC
Location: 140487 - 141149 (-)
Gene ID: B15_contig_1144_107
Type: TC
Location: 141181 - 142926 (-)
Type: TC
Location: 141181 - 142926 (-)
Gene ID: B15_contig_1144_108
Type: TC
Location: 143260 - 144576 (-)
Type: TC
Location: 143260 - 144576 (-)
Gene ID: B15_contig_1144_109
Type: CAZyme
Location: 144663 - 147326 (-)
Type: CAZyme
Location: 144663 - 147326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.