Cluster: B15.bin_8_CGC26
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 5
- Substrate: arabinogalactan/xylan
- Genome ID: B15.bin_8
- CGC Family ID: CGCFAM_00936
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1144 | B15_contig_1144_33 | 40780 | 43041 | + | GT51 |
| TC | B15_contig_1144 | B15_contig_1144_34 | 43130 | 44041 | - | 3.A.1.1.36 |
| TC | B15_contig_1144 | B15_contig_1144_35 | 44038 | 44982 | - | 3.A.1.1.36 |
| STP | B15_contig_1144 | B15_contig_1144_36 | 45073 | 46380 | - | SBP_bac_1 |
| CAZyme | B15_contig_1144 | B15_contig_1144_37 | 46678 | 47691 | - | GH43_26 |
| TF | B15_contig_1144 | B15_contig_1144_38 | 47940 | 49016 | - | LacI |
| CAZyme | B15_contig_1144 | B15_contig_1144_39 | 49065 | 51185 | - | GH43_27 |
| CAZyme | B15_contig_1144 | B15_contig_1144_40 | 51286 | 52878 | + | GH43_4 |
| CAZyme | B15_contig_1144 | B15_contig_1144_41 | 52875 | 54497 | + | GH43_4 |
Gene ID: B15_contig_1144_33
Type: CAZyme
Location: 40780 - 43041 (+)
Type: CAZyme
Location: 40780 - 43041 (+)
Gene ID: B15_contig_1144_34
Type: TC
Location: 43130 - 44041 (-)
Type: TC
Location: 43130 - 44041 (-)
Gene ID: B15_contig_1144_35
Type: TC
Location: 44038 - 44982 (-)
Type: TC
Location: 44038 - 44982 (-)
Gene ID: B15_contig_1144_36
Type: STP
Location: 45073 - 46380 (-)
Type: STP
Location: 45073 - 46380 (-)
Gene ID: B15_contig_1144_37
Type: CAZyme
Location: 46678 - 47691 (-)
Type: CAZyme
Location: 46678 - 47691 (-)
Gene ID: B15_contig_1144_38
Type: TF
Location: 47940 - 49016 (-)
Type: TF
Location: 47940 - 49016 (-)
Gene ID: B15_contig_1144_39
Type: CAZyme
Location: 49065 - 51185 (-)
Type: CAZyme
Location: 49065 - 51185 (-)
Gene ID: B15_contig_1144_40
Type: CAZyme
Location: 51286 - 52878 (+)
Type: CAZyme
Location: 51286 - 52878 (+)
Gene ID: B15_contig_1144_41
Type: CAZyme
Location: 52875 - 54497 (+)
Type: CAZyme
Location: 52875 - 54497 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B15_contig_1144_35 | vegan > omnivore | 1.74565 | 0.00918 |
| B15_contig_1144_36 | vegan > omnivore | 1.25132 | 0.00918 |
| B15_contig_1144_40 | vegan > omnivore | 1.04873 | 0.00918 |