Cluster: B15.bin_8_CGC19
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.bin_8
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1142 | B15_contig_1142_1400 | 1579211 | 1579972 | - | 3.A.1.5.41 |
| TC | B15_contig_1142 | B15_contig_1142_1401 | 1579965 | 1580753 | - | 3.A.1.5.23 |
| TC | B15_contig_1142 | B15_contig_1142_1402 | 1580750 | 1581619 | - | 3.A.1.5.3 |
| TC | B15_contig_1142 | B15_contig_1142_1403 | 1581616 | 1582596 | - | 3.A.1.5.38 |
| TC | B15_contig_1142 | B15_contig_1142_1404 | 1582680 | 1584314 | - | 3.A.1.5.18 |
| pfam | B15_contig_1142 | B15_contig_1142_1405 | 1584470 | 1585765 | + | Flavoprotein | DFP |
| pfam | B15_contig_1142 | B15_contig_1142_1406 | 1585777 | 1586547 | + | Pan_kinase |
| TC | B15_contig_1142 | B15_contig_1142_1407 | 1586623 | 1588053 | - | 3.A.1.1.48 |
| CAZyme | B15_contig_1142 | B15_contig_1142_1408 | 1588541 | 1590613 | - | GH42 |
| TF | B15_contig_1142 | B15_contig_1142_1409 | 1590800 | 1591801 | + | LacI |
| TC | B15_contig_1142 | B15_contig_1142_1410 | 1591859 | 1593151 | - | 2.A.23.4.1 |
| pfam | B15_contig_1142 | B15_contig_1142_1411 | 1593275 | 1594069 | - | PseudoU_synth_2 |
| STP | B15_contig_1142 | B15_contig_1142_1412 | 1594079 | 1595971 | - | SIS | SIS |
| TC | B15_contig_1142 | B15_contig_1142_1413 | 1596232 | 1597026 | - | 3.A.1.3.24 |
| TC | B15_contig_1142 | B15_contig_1142_1414 | 1597037 | 1598020 | - | 3.A.1.3.24 |
| TC | B15_contig_1142 | B15_contig_1142_1415 | 1598057 | 1598983 | - | 3.A.1.3.24 |
| TC | B15_contig_1142 | B15_contig_1142_1416 | 1599135 | 1600076 | - | 3.A.1.3.24 |
| pfam | B15_contig_1142 | B15_contig_1142_1417 | 1600196 | 1600675 | - | SmpB |
| TC | B15_contig_1142 | B15_contig_1142_1418 | 1600794 | 1602239 | - | 3.A.7.14.1 |
| pfam | B15_contig_1142 | B15_contig_1142_1419 | 1602346 | 1603269 | - | FtsX | FtsX_ECD |
| TC | B15_contig_1142 | B15_contig_1142_1420 | 1603269 | 1604495 | - | 3.A.1.140.1 |
Gene ID: B15_contig_1142_1400
Type: TC
Location: 1579211 - 1579972 (-)
Type: TC
Location: 1579211 - 1579972 (-)
Gene ID: B15_contig_1142_1401
Type: TC
Location: 1579965 - 1580753 (-)
Type: TC
Location: 1579965 - 1580753 (-)
Gene ID: B15_contig_1142_1402
Type: TC
Location: 1580750 - 1581619 (-)
Type: TC
Location: 1580750 - 1581619 (-)
Gene ID: B15_contig_1142_1403
Type: TC
Location: 1581616 - 1582596 (-)
Type: TC
Location: 1581616 - 1582596 (-)
Gene ID: B15_contig_1142_1404
Type: TC
Location: 1582680 - 1584314 (-)
Type: TC
Location: 1582680 - 1584314 (-)
Gene ID: B15_contig_1142_1405
Type: pfam
Location: 1584470 - 1585765 (+)
Type: pfam
Location: 1584470 - 1585765 (+)
Gene ID: B15_contig_1142_1406
Type: pfam
Location: 1585777 - 1586547 (+)
Type: pfam
Location: 1585777 - 1586547 (+)
Gene ID: B15_contig_1142_1407
Type: TC
Location: 1586623 - 1588053 (-)
Type: TC
Location: 1586623 - 1588053 (-)
Gene ID: B15_contig_1142_1408
Type: CAZyme
Location: 1588541 - 1590613 (-)
Type: CAZyme
Location: 1588541 - 1590613 (-)
Gene ID: B15_contig_1142_1409
Type: TF
Location: 1590800 - 1591801 (+)
Type: TF
Location: 1590800 - 1591801 (+)
Gene ID: B15_contig_1142_1410
Type: TC
Location: 1591859 - 1593151 (-)
Type: TC
Location: 1591859 - 1593151 (-)
Gene ID: B15_contig_1142_1411
Type: pfam
Location: 1593275 - 1594069 (-)
Type: pfam
Location: 1593275 - 1594069 (-)
Gene ID: B15_contig_1142_1412
Type: STP
Location: 1594079 - 1595971 (-)
Type: STP
Location: 1594079 - 1595971 (-)
Gene ID: B15_contig_1142_1413
Type: TC
Location: 1596232 - 1597026 (-)
Type: TC
Location: 1596232 - 1597026 (-)
Gene ID: B15_contig_1142_1414
Type: TC
Location: 1597037 - 1598020 (-)
Type: TC
Location: 1597037 - 1598020 (-)
Gene ID: B15_contig_1142_1415
Type: TC
Location: 1598057 - 1598983 (-)
Type: TC
Location: 1598057 - 1598983 (-)
Gene ID: B15_contig_1142_1416
Type: TC
Location: 1599135 - 1600076 (-)
Type: TC
Location: 1599135 - 1600076 (-)
Gene ID: B15_contig_1142_1417
Type: pfam
Location: 1600196 - 1600675 (-)
Type: pfam
Location: 1600196 - 1600675 (-)
Gene ID: B15_contig_1142_1418
Type: TC
Location: 1600794 - 1602239 (-)
Type: TC
Location: 1600794 - 1602239 (-)
Gene ID: B15_contig_1142_1419
Type: pfam
Location: 1602346 - 1603269 (-)
Type: pfam
Location: 1602346 - 1603269 (-)
Gene ID: B15_contig_1142_1420
Type: TC
Location: 1603269 - 1604495 (-)
Type: TC
Location: 1603269 - 1604495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium dentium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B15_contig_1142_1401 | vegetarian > omnivore | 1.01026 | 0.02538 |