Cluster: B15.CMAG_2_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.CMAG_2
- CGC Family ID: CGCFAM_04914
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1 | B15_contig_1_390 | 410946 | 412037 | - | 4.A.2.1.9 |
| TC | B15_contig_1 | B15_contig_1_391 | 412062 | 412376 | - | 4.A.2.1.9 |
| TC | B15_contig_1 | B15_contig_1_392 | 412394 | 412864 | - | 4.A.2.1.9 |
| TF | B15_contig_1 | B15_contig_1_393 | 412891 | 414444 | - | HTH_11 | Mga |
| CAZyme | B15_contig_1 | B15_contig_1_394 | 414739 | 417057 | - | GH31_3 |
| TC | B15_contig_1 | B15_contig_1_395 | 417067 | 418449 | - | 2.A.2.3.4 |
Gene ID: B15_contig_1_390
Type: TC
Location: 410946 - 412037 (-)
Type: TC
Location: 410946 - 412037 (-)
Gene ID: B15_contig_1_391
Type: TC
Location: 412062 - 412376 (-)
Type: TC
Location: 412062 - 412376 (-)
Gene ID: B15_contig_1_392
Type: TC
Location: 412394 - 412864 (-)
Type: TC
Location: 412394 - 412864 (-)
Gene ID: B15_contig_1_393
Type: TF
Location: 412891 - 414444 (-)
Type: TF
Location: 412891 - 414444 (-)
Gene ID: B15_contig_1_394
Type: CAZyme
Location: 414739 - 417057 (-)
Type: CAZyme
Location: 414739 - 417057 (-)
Gene ID: B15_contig_1_395
Type: TC
Location: 417067 - 418449 (-)
Type: TC
Location: 417067 - 418449 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.