Cluster: B15.CMAG_2_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 9
- Substrate:
- Genome ID: B15.CMAG_2
- CGC Family ID: CGCFAM_00698
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1 | B15_contig_1_352 | 372317 | 373363 | + | GT9 |
| CAZyme | B15_contig_1 | B15_contig_1_353 | 373367 | 374347 | + | GT9 |
| TC | B15_contig_1 | B15_contig_1_354 | 374417 | 375670 | - | 9.B.67.5.1 |
| CAZyme | B15_contig_1 | B15_contig_1_355 | 375716 | 376699 | - | GT2 |
| CAZyme | B15_contig_1 | B15_contig_1_356 | 376784 | 377809 | - | GT8 |
| pfam | B15_contig_1 | B15_contig_1_357 | 377835 | 378527 | - | WaaY |
| CAZyme | B15_contig_1 | B15_contig_1_358 | 378537 | 379532 | - | GT8 |
| CAZyme | B15_contig_1 | B15_contig_1_359 | 379549 | 380565 | - | GT8 |
| pfam | B15_contig_1 | B15_contig_1_360 | 380581 | 381378 | - | Kdo |
| CAZyme | B15_contig_1 | B15_contig_1_361 | 381371 | 382495 | - | GT4 |
| CAZyme | B15_contig_1 | B15_contig_1_362 | 382492 | 383550 | - | GT9 |
| CAZyme | B15_contig_1 | B15_contig_1_363 | 383963 | 385240 | + | GT30 |
Gene ID: B15_contig_1_352
Type: CAZyme
Location: 372317 - 373363 (+)
Type: CAZyme
Location: 372317 - 373363 (+)
Gene ID: B15_contig_1_353
Type: CAZyme
Location: 373367 - 374347 (+)
Type: CAZyme
Location: 373367 - 374347 (+)
Gene ID: B15_contig_1_354
Type: TC
Location: 374417 - 375670 (-)
Type: TC
Location: 374417 - 375670 (-)
Gene ID: B15_contig_1_355
Type: CAZyme
Location: 375716 - 376699 (-)
Type: CAZyme
Location: 375716 - 376699 (-)
Gene ID: B15_contig_1_356
Type: CAZyme
Location: 376784 - 377809 (-)
Type: CAZyme
Location: 376784 - 377809 (-)
Gene ID: B15_contig_1_357
Type: pfam
Location: 377835 - 378527 (-)
Type: pfam
Location: 377835 - 378527 (-)
Gene ID: B15_contig_1_358
Type: CAZyme
Location: 378537 - 379532 (-)
Type: CAZyme
Location: 378537 - 379532 (-)
Gene ID: B15_contig_1_359
Type: CAZyme
Location: 379549 - 380565 (-)
Type: CAZyme
Location: 379549 - 380565 (-)
Gene ID: B15_contig_1_360
Type: pfam
Location: 380581 - 381378 (-)
Type: pfam
Location: 380581 - 381378 (-)
Gene ID: B15_contig_1_361
Type: CAZyme
Location: 381371 - 382495 (-)
Type: CAZyme
Location: 381371 - 382495 (-)
Gene ID: B15_contig_1_362
Type: CAZyme
Location: 382492 - 383550 (-)
Type: CAZyme
Location: 382492 - 383550 (-)
Gene ID: B15_contig_1_363
Type: CAZyme
Location: 383963 - 385240 (+)
Type: CAZyme
Location: 383963 - 385240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.