Cluster: B15.CMAG_2_CGC57
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: B15.CMAG_2
- CGC Family ID: CGCFAM_00883
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1 | B15_contig_1_4433 | 4793360 | 4796452 | + | GH2 |
| pfam | B15_contig_1 | B15_contig_1_4434 | 4796449 | 4796898 | + | DUF386 |
| TC | B15_contig_1 | B15_contig_1_4435 | 4796961 | 4798394 | + | 2.A.3.7.4 |
| NULL(UNKNOWN) | B15_contig_1 | B15_contig_1_4436 | 4798528 | 4799598 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B15_contig_1 | B15_contig_1_4437 | 4799615 | 4801966 | + | GH63 |
Gene ID: B15_contig_1_4433
Type: CAZyme
Location: 4793360 - 4796452 (+)
Type: CAZyme
Location: 4793360 - 4796452 (+)
Gene ID: B15_contig_1_4434
Type: pfam
Location: 4796449 - 4796898 (+)
Type: pfam
Location: 4796449 - 4796898 (+)
Gene ID: B15_contig_1_4435
Type: TC
Location: 4796961 - 4798394 (+)
Type: TC
Location: 4796961 - 4798394 (+)
Gene ID: B15_contig_1_4436
Type:
Location: 4798528 - 4799598 (+)
Type:
Location: 4798528 - 4799598 (+)
Gene ID: B15_contig_1_4437
Type: CAZyme
Location: 4799615 - 4801966 (+)
Type: CAZyme
Location: 4799615 - 4801966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.