Cluster: B15.CMAG_2_CGC54
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.CMAG_2
- CGC Family ID: CGCFAM_00373
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1 | B15_contig_1_4149 | 4494377 | 4495036 | - | 1.C.113.1.10 |
| pfam | B15_contig_1 | B15_contig_1_4150 | 4495200 | 4495511 | - | ASCH |
| CAZyme | B15_contig_1 | B15_contig_1_4151 | 4495556 | 4496989 | + | GH1 |
| TC | B15_contig_1 | B15_contig_1_4152 | 4497037 | 4497930 | - | 9.B.153.2.1 |
Gene ID: B15_contig_1_4149
Type: TC
Location: 4494377 - 4495036 (-)
Type: TC
Location: 4494377 - 4495036 (-)
Gene ID: B15_contig_1_4150
Type: pfam
Location: 4495200 - 4495511 (-)
Type: pfam
Location: 4495200 - 4495511 (-)
Gene ID: B15_contig_1_4151
Type: CAZyme
Location: 4495556 - 4496989 (+)
Type: CAZyme
Location: 4495556 - 4496989 (+)
Gene ID: B15_contig_1_4152
Type: TC
Location: 4497037 - 4497930 (-)
Type: TC
Location: 4497037 - 4497930 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B15_contig_1_4150 | omnivore > vegetarian | 1.43498 | 0.04407 |