Cluster: B15.CMAG_2_CGC52
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1 | B15_contig_1_4025 | 4343866 | 4345287 | - | 2.A.1.1.95 |
| pfam | B15_contig_1 | B15_contig_1_4026 | 4345309 | 4346763 | - | FAD_binding_4 | FAD-oxidase_C |
| pfam | B15_contig_1 | B15_contig_1_4027 | 4346833 | 4347618 | - | adh_short | KR | adh_short_C2 |
| TC | B15_contig_1 | B15_contig_1_4028 | 4347937 | 4349214 | + | 2.A.1.52.2 |
| pfam | B15_contig_1 | B15_contig_1_4029 | 4349241 | 4350719 | + | FGGY_N | FGGY_C |
| STP | B15_contig_1 | B15_contig_1_4030 | 4350884 | 4351804 | + | PfkB |
| TC | B15_contig_1 | B15_contig_1_4031 | 4351972 | 4353489 | + | 1.B.3.1.2 |
| TC | B15_contig_1 | B15_contig_1_4032 | 4353550 | 4354920 | + | 4.A.1.2.1 |
| CAZyme | B15_contig_1 | B15_contig_1_4033 | 4354926 | 4356329 | + | GH32 |
Gene ID: B15_contig_1_4025
Type: TC
Location: 4343866 - 4345287 (-)
Type: TC
Location: 4343866 - 4345287 (-)
Gene ID: B15_contig_1_4026
Type: pfam
Location: 4345309 - 4346763 (-)
Type: pfam
Location: 4345309 - 4346763 (-)
Gene ID: B15_contig_1_4027
Type: pfam
Location: 4346833 - 4347618 (-)
Type: pfam
Location: 4346833 - 4347618 (-)
Gene ID: B15_contig_1_4028
Type: TC
Location: 4347937 - 4349214 (+)
Type: TC
Location: 4347937 - 4349214 (+)
Gene ID: B15_contig_1_4029
Type: pfam
Location: 4349241 - 4350719 (+)
Type: pfam
Location: 4349241 - 4350719 (+)
Gene ID: B15_contig_1_4030
Type: STP
Location: 4350884 - 4351804 (+)
Type: STP
Location: 4350884 - 4351804 (+)
Gene ID: B15_contig_1_4031
Type: TC
Location: 4351972 - 4353489 (+)
Type: TC
Location: 4351972 - 4353489 (+)
Gene ID: B15_contig_1_4032
Type: TC
Location: 4353550 - 4354920 (+)
Type: TC
Location: 4353550 - 4354920 (+)
Gene ID: B15_contig_1_4033
Type: CAZyme
Location: 4354926 - 4356329 (+)
Type: CAZyme
Location: 4354926 - 4356329 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| B15_contig_1_4025 | omnivore > vegetarian | 1.93194 | 0.04407 |
| B15_contig_1_4028 | omnivore > vegetarian | 1.87384 | 0.04407 |