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Cluster: B15.CMAG_2_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B15_contig_1 B15_contig_1_2813 3048128 3049567 - GH1
TC B15_contig_1 B15_contig_1_2814 3049592 3051265 - 1.B.3.1.3
TC B15_contig_1 B15_contig_1_2815 3051321 3051632 - 4.A.3.2.9
TC B15_contig_1 B15_contig_1_2816 3051660 3052982 - 4.A.3.2.7
TC B15_contig_1 B15_contig_1_2817 3053096 3053407 - 4.A.3.2.9
TF B15_contig_1 B15_contig_1_2818 3053606 3054304 + GntR
TC B15_contig_1 B15_contig_1_2819 3054349 3055248 - 2.A.7.3.2
TC B15_contig_1 B15_contig_1_2820 3055443 3056630 + 2.A.1.2.55
Gene ID: B15_contig_1_2813
Type: CAZyme
Location: 3048128 - 3049567 (-)
Gene ID: B15_contig_1_2814
Type: TC
Location: 3049592 - 3051265 (-)
Gene ID: B15_contig_1_2815
Type: TC
Location: 3051321 - 3051632 (-)
Gene ID: B15_contig_1_2816
Type: TC
Location: 3051660 - 3052982 (-)
Gene ID: B15_contig_1_2817
Type: TC
Location: 3053096 - 3053407 (-)
Gene ID: B15_contig_1_2818
Type: TF
Location: 3053606 - 3054304 (+)
Gene ID: B15_contig_1_2819
Type: TC
Location: 3054349 - 3055248 (-)
Gene ID: B15_contig_1_2820
Type: TC
Location: 3055443 - 3056630 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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