Cluster: B15.CMAG_2_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1 | B15_contig_1_251 | 255146 | 256432 | - | 2.A.23.1.7 |
| STP | B15_contig_1 | B15_contig_1_252 | 256615 | 258564 | - | EAL | GGDEF |
| TC | B15_contig_1 | B15_contig_1_253 | 258685 | 262158 | - | 1.B.55.3.1 |
| CAZyme | B15_contig_1 | B15_contig_1_254 | 262140 | 263246 | - | GH8 |
| TC | B15_contig_1 | B15_contig_1_255 | 263253 | 265556 | - | 4.D.3.1.6 |
| CAZyme | B15_contig_1 | B15_contig_1_256 | 265603 | 268221 | - | GT2 |
Gene ID: B15_contig_1_251
Type: TC
Location: 255146 - 256432 (-)
Type: TC
Location: 255146 - 256432 (-)
Gene ID: B15_contig_1_252
Type: STP
Location: 256615 - 258564 (-)
Type: STP
Location: 256615 - 258564 (-)
Gene ID: B15_contig_1_253
Type: TC
Location: 258685 - 262158 (-)
Type: TC
Location: 258685 - 262158 (-)
Gene ID: B15_contig_1_254
Type: CAZyme
Location: 262140 - 263246 (-)
Type: CAZyme
Location: 262140 - 263246 (-)
Gene ID: B15_contig_1_255
Type: TC
Location: 263253 - 265556 (-)
Type: TC
Location: 263253 - 265556 (-)
Gene ID: B15_contig_1_256
Type: CAZyme
Location: 265603 - 268221 (-)
Type: CAZyme
Location: 265603 - 268221 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.