Cluster: B15.CMAG_2_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: B15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1 | B15_contig_1_1864 | 2045337 | 2046485 | - | CE9 |
| pfam | B15_contig_1 | B15_contig_1_1865 | 2046545 | 2047345 | - | Glucosamine_iso |
| TC | B15_contig_1 | B15_contig_1_1866 | 2047678 | 2049624 | + | 4.A.1.1.2 |
| TC | B15_contig_1 | B15_contig_1_1867 | 2049713 | 2050993 | - | 2.A.47.4.7 |
| pfam | B15_contig_1 | B15_contig_1_1868 | 2051007 | 2051477 | - | DUF386 |
| CAZyme | B15_contig_1 | B15_contig_1_1869 | 2051474 | 2052643 | - | GH33 |
| TC | B15_contig_1 | B15_contig_1_1870 | 2052679 | 2053437 | - | 2.A.109.2.3 |
Gene ID: B15_contig_1_1864
Type: CAZyme
Location: 2045337 - 2046485 (-)
Type: CAZyme
Location: 2045337 - 2046485 (-)
Gene ID: B15_contig_1_1865
Type: pfam
Location: 2046545 - 2047345 (-)
Type: pfam
Location: 2046545 - 2047345 (-)
Gene ID: B15_contig_1_1866
Type: TC
Location: 2047678 - 2049624 (+)
Type: TC
Location: 2047678 - 2049624 (+)
Gene ID: B15_contig_1_1867
Type: TC
Location: 2049713 - 2050993 (-)
Type: TC
Location: 2049713 - 2050993 (-)
Gene ID: B15_contig_1_1868
Type: pfam
Location: 2051007 - 2051477 (-)
Type: pfam
Location: 2051007 - 2051477 (-)
Gene ID: B15_contig_1_1869
Type: CAZyme
Location: 2051474 - 2052643 (-)
Type: CAZyme
Location: 2051474 - 2052643 (-)
Gene ID: B15_contig_1_1870
Type: TC
Location: 2052679 - 2053437 (-)
Type: TC
Location: 2052679 - 2053437 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.