Cluster: B15.CMAG_2_CGC24
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: B15.CMAG_2
- CGC Family ID: CGCFAM_01811
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B15_contig_1 | B15_contig_1_1514 | 1677074 | 1678960 | + | 4.C.1.1.6 |
| TC | B15_contig_1 | B15_contig_1_1515 | 1679198 | 1680457 | + | 2.A.39.1.1 |
| peptidase | B15_contig_1 | B15_contig_1_1516 | 1680447 | 1681730 | + | M38.UNW |
| TF | B15_contig_1 | B15_contig_1_1517 | 1681770 | 1682669 | - | HTH_1 |
| TC | B15_contig_1 | B15_contig_1_1518 | 1682779 | 1683438 | + | 2.A.53.3.12 |
| STP | B15_contig_1 | B15_contig_1_1519 | 1683469 | 1683939 | + | Cyanate_lyase |
| TC | B15_contig_1 | B15_contig_1_1520 | 1683945 | 1685126 | + | 2.A.1.17.1 |
| pfam | B15_contig_1 | B15_contig_1_1521 | 1685214 | 1685834 | - | Hexapep | Mac | Hexapep_2 |
| TC | B15_contig_1 | B15_contig_1_1522 | 1685891 | 1687144 | - | 2.A.1.5.1 |
| CAZyme | B15_contig_1 | B15_contig_1_1523 | 1687196 | 1690270 | - | GH2 |
Gene ID: B15_contig_1_1514
Type: TC
Location: 1677074 - 1678960 (+)
Type: TC
Location: 1677074 - 1678960 (+)
Gene ID: B15_contig_1_1515
Type: TC
Location: 1679198 - 1680457 (+)
Type: TC
Location: 1679198 - 1680457 (+)
Gene ID: B15_contig_1_1516
Type: peptidase
Location: 1680447 - 1681730 (+)
Type: peptidase
Location: 1680447 - 1681730 (+)
Gene ID: B15_contig_1_1517
Type: TF
Location: 1681770 - 1682669 (-)
Type: TF
Location: 1681770 - 1682669 (-)
Gene ID: B15_contig_1_1518
Type: TC
Location: 1682779 - 1683438 (+)
Type: TC
Location: 1682779 - 1683438 (+)
Gene ID: B15_contig_1_1519
Type: STP
Location: 1683469 - 1683939 (+)
Type: STP
Location: 1683469 - 1683939 (+)
Gene ID: B15_contig_1_1520
Type: TC
Location: 1683945 - 1685126 (+)
Type: TC
Location: 1683945 - 1685126 (+)
Gene ID: B15_contig_1_1521
Type: pfam
Location: 1685214 - 1685834 (-)
Type: pfam
Location: 1685214 - 1685834 (-)
Gene ID: B15_contig_1_1522
Type: TC
Location: 1685891 - 1687144 (-)
Type: TC
Location: 1685891 - 1687144 (-)
Gene ID: B15_contig_1_1523
Type: CAZyme
Location: 1687196 - 1690270 (-)
Type: CAZyme
Location: 1687196 - 1690270 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.