Cluster: B15.CMAG_2_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B15.CMAG_2
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B15_contig_1 | B15_contig_1_726 | 783943 | 785979 | + | GH31_13 |
| TC | B15_contig_1 | B15_contig_1_727 | 786025 | 787410 | + | 2.A.2.3.9 |
| TC | B15_contig_1 | B15_contig_1_728 | 787453 | 788856 | + | 2.A.2.3.9 |
| TC | B15_contig_1 | B15_contig_1_729 | 788857 | 789615 | + | 1.B.35.2.2 |
| pfam | B15_contig_1 | B15_contig_1_730 | 789694 | 790215 | + | HTH_28 | HTH_28 |
| pfam | B15_contig_1 | B15_contig_1_731 | 790440 | 791042 | + | rve | rve_2 | rve_3 |
| TC | B15_contig_1 | B15_contig_1_732 | 791143 | 792408 | - | 2.A.1.52.1 |
Gene ID: B15_contig_1_726
Type: CAZyme
Location: 783943 - 785979 (+)
Type: CAZyme
Location: 783943 - 785979 (+)
Gene ID: B15_contig_1_727
Type: TC
Location: 786025 - 787410 (+)
Type: TC
Location: 786025 - 787410 (+)
Gene ID: B15_contig_1_728
Type: TC
Location: 787453 - 788856 (+)
Type: TC
Location: 787453 - 788856 (+)
Gene ID: B15_contig_1_729
Type: TC
Location: 788857 - 789615 (+)
Type: TC
Location: 788857 - 789615 (+)
Gene ID: B15_contig_1_730
Type: pfam
Location: 789694 - 790215 (+)
Type: pfam
Location: 789694 - 790215 (+)
Gene ID: B15_contig_1_731
Type: pfam
Location: 790440 - 791042 (+)
Type: pfam
Location: 790440 - 791042 (+)
Gene ID: B15_contig_1_732
Type: TC
Location: 791143 - 792408 (-)
Type: TC
Location: 791143 - 792408 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Species
Escherichia coli
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.