Cluster: B137.CMAG_3_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: B137.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B137_contig_801 | B137_contig_801_288 | 352363 | 354096 | - | 3.A.1.5.11 |
| TC | B137_contig_801 | B137_contig_801_289 | 354089 | 355240 | - | 3.A.1.5.35 |
| TC | B137_contig_801 | B137_contig_801_290 | 355242 | 356330 | - | 3.A.1.5.39 |
| TC | B137_contig_801 | B137_contig_801_291 | 356486 | 358114 | - | 3.A.1.5.18 |
| CAZyme | B137_contig_801 | B137_contig_801_292 | 358440 | 359696 | - | CE9 |
| sulfatase | B137_contig_801 | B137_contig_801_293 | 359834 | 360646 | - | S1_9 |
| pfam | B137_contig_801 | B137_contig_801_294 | 360897 | 362036 | + | ROK |
| TC | B137_contig_801 | B137_contig_801_295 | 362080 | 362814 | - | 9.B.158.1.1 |
| TF | B137_contig_801 | B137_contig_801_296 | 363058 | 364266 | + | MarR |
| STP | B137_contig_801 | B137_contig_801_297 | 364371 | 365267 | + | PfkB |
| TC | B137_contig_801 | B137_contig_801_298 | 365336 | 366619 | + | 2.A.1.7.17 |
Gene ID: B137_contig_801_288
Type: TC
Location: 352363 - 354096 (-)
Type: TC
Location: 352363 - 354096 (-)
Gene ID: B137_contig_801_289
Type: TC
Location: 354089 - 355240 (-)
Type: TC
Location: 354089 - 355240 (-)
Gene ID: B137_contig_801_290
Type: TC
Location: 355242 - 356330 (-)
Type: TC
Location: 355242 - 356330 (-)
Gene ID: B137_contig_801_291
Type: TC
Location: 356486 - 358114 (-)
Type: TC
Location: 356486 - 358114 (-)
Gene ID: B137_contig_801_292
Type: CAZyme
Location: 358440 - 359696 (-)
Type: CAZyme
Location: 358440 - 359696 (-)
Gene ID: B137_contig_801_293
Type: sulfatase
Location: 359834 - 360646 (-)
Type: sulfatase
Location: 359834 - 360646 (-)
Gene ID: B137_contig_801_294
Type: pfam
Location: 360897 - 362036 (+)
Type: pfam
Location: 360897 - 362036 (+)
Gene ID: B137_contig_801_295
Type: TC
Location: 362080 - 362814 (-)
Type: TC
Location: 362080 - 362814 (-)
Gene ID: B137_contig_801_296
Type: TF
Location: 363058 - 364266 (+)
Type: TF
Location: 363058 - 364266 (+)
Gene ID: B137_contig_801_297
Type: STP
Location: 364371 - 365267 (+)
Type: STP
Location: 364371 - 365267 (+)
Gene ID: B137_contig_801_298
Type: TC
Location: 365336 - 366619 (+)
Type: TC
Location: 365336 - 366619 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium bifidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.