Cluster: B137.CMAG_3_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: B137.CMAG_3
- CGC Family ID: CGCFAM_01882
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B137_contig_801 | B137_contig_801_129 | 161001 | 164150 | - | GT2 |
| TF | B137_contig_801 | B137_contig_801_130 | 164184 | 164483 | - | Whib |
| pfam | B137_contig_801 | B137_contig_801_131 | 164765 | 166240 | + | LytR_cpsA_psr |
| TC | B137_contig_801 | B137_contig_801_132 | 166501 | 168318 | + | 3.A.7.17.1 |
| TF | B137_contig_801 | B137_contig_801_133 | 168434 | 168712 | + | Whib |
| STP | B137_contig_801 | B137_contig_801_134 | 168847 | 170382 | - | HATPase_c |
| TC | B137_contig_801 | B137_contig_801_135 | 170471 | 171358 | + | 1.C.113.1.4 |
Gene ID: B137_contig_801_129
Type: CAZyme
Location: 161001 - 164150 (-)
Type: CAZyme
Location: 161001 - 164150 (-)
Gene ID: B137_contig_801_130
Type: TF
Location: 164184 - 164483 (-)
Type: TF
Location: 164184 - 164483 (-)
Gene ID: B137_contig_801_131
Type: pfam
Location: 164765 - 166240 (+)
Type: pfam
Location: 164765 - 166240 (+)
Gene ID: B137_contig_801_132
Type: TC
Location: 166501 - 168318 (+)
Type: TC
Location: 166501 - 168318 (+)
Gene ID: B137_contig_801_133
Type: TF
Location: 168434 - 168712 (+)
Type: TF
Location: 168434 - 168712 (+)
Gene ID: B137_contig_801_134
Type: STP
Location: 168847 - 170382 (-)
Type: STP
Location: 168847 - 170382 (-)
Gene ID: B137_contig_801_135
Type: TC
Location: 170471 - 171358 (+)
Type: TC
Location: 170471 - 171358 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium bifidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.