Cluster: B137.CMAG_3_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: B137.CMAG_3
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B137_contig_801 | B137_contig_801_794 | 1017886 | 1018569 | + | 2.A.53.3.12 |
| TF | B137_contig_801 | B137_contig_801_795 | 1018713 | 1019297 | + | LacI |
| TC | B137_contig_801 | B137_contig_801_796 | 1019471 | 1020793 | + | 9.A.40.2.1 |
| TC | B137_contig_801 | B137_contig_801_797 | 1020829 | 1021902 | - | 2.A.7.17.1 |
| pfam | B137_contig_801 | B137_contig_801_798 | 1022349 | 1022828 | + | Ferritin |
| pfam | B137_contig_801 | B137_contig_801_799 | 1023015 | 1023755 | - | YgjP-like | SprT-like |
| TC | B137_contig_801 | B137_contig_801_800 | 1024041 | 1025558 | - | 4.A.7.1.4 |
| pfam | B137_contig_801 | B137_contig_801_801 | 1025624 | 1025896 | - | PTS_IIB |
| TC | B137_contig_801 | B137_contig_801_802 | 1026033 | 1026482 | - | 4.A.5.1.3 |
| TF | B137_contig_801 | B137_contig_801_803 | 1026812 | 1027864 | + | LacI |
| CAZyme | B137_contig_801 | B137_contig_801_804 | 1028337 | 1030673 | - | GH20 |
| CAZyme | B137_contig_801 | B137_contig_801_805 | 1031426 | 1034923 | + | GH51_9 |
| TC | B137_contig_801 | B137_contig_801_806 | 1035298 | 1035732 | - | 1.A.22.1.9 |
Gene ID: B137_contig_801_794
Type: TC
Location: 1017886 - 1018569 (+)
Type: TC
Location: 1017886 - 1018569 (+)
Gene ID: B137_contig_801_795
Type: TF
Location: 1018713 - 1019297 (+)
Type: TF
Location: 1018713 - 1019297 (+)
Gene ID: B137_contig_801_796
Type: TC
Location: 1019471 - 1020793 (+)
Type: TC
Location: 1019471 - 1020793 (+)
Gene ID: B137_contig_801_797
Type: TC
Location: 1020829 - 1021902 (-)
Type: TC
Location: 1020829 - 1021902 (-)
Gene ID: B137_contig_801_798
Type: pfam
Location: 1022349 - 1022828 (+)
Type: pfam
Location: 1022349 - 1022828 (+)
Gene ID: B137_contig_801_799
Type: pfam
Location: 1023015 - 1023755 (-)
Type: pfam
Location: 1023015 - 1023755 (-)
Gene ID: B137_contig_801_800
Type: TC
Location: 1024041 - 1025558 (-)
Type: TC
Location: 1024041 - 1025558 (-)
Gene ID: B137_contig_801_801
Type: pfam
Location: 1025624 - 1025896 (-)
Type: pfam
Location: 1025624 - 1025896 (-)
Gene ID: B137_contig_801_802
Type: TC
Location: 1026033 - 1026482 (-)
Type: TC
Location: 1026033 - 1026482 (-)
Gene ID: B137_contig_801_803
Type: TF
Location: 1026812 - 1027864 (+)
Type: TF
Location: 1026812 - 1027864 (+)
Gene ID: B137_contig_801_804
Type: CAZyme
Location: 1028337 - 1030673 (-)
Type: CAZyme
Location: 1028337 - 1030673 (-)
Gene ID: B137_contig_801_805
Type: CAZyme
Location: 1031426 - 1034923 (+)
Type: CAZyme
Location: 1031426 - 1034923 (+)
Gene ID: B137_contig_801_806
Type: TC
Location: 1035298 - 1035732 (-)
Type: TC
Location: 1035298 - 1035732 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium bifidum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.