Cluster: B125.bin_9_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_07419
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_342 | B125_contig_342_34 | 31959 | 32591 | + | 2.A.87.1.2 |
| pfam | B125_contig_342 | B125_contig_342_35 | 32668 | 34020 | - | MatE | MatE |
| CAZyme | B125_contig_342 | B125_contig_342_36 | 34193 | 36574 | + | GH39 |
| pfam | B125_contig_342 | B125_contig_342_37 | 36783 | 37211 | + | CGDB |
| pfam | B125_contig_342 | B125_contig_342_38 | 37225 | 38202 | + | AP_endonuc_2 |
| CAZyme | B125_contig_342 | B125_contig_342_39 | 38240 | 39343 | + | GH179 |
| CAZyme | B125_contig_342 | B125_contig_342_40 | 39429 | 40499 | + | GH179 |
Gene ID: B125_contig_342_34
Type: TC
Location: 31959 - 32591 (+)
Type: TC
Location: 31959 - 32591 (+)
Gene ID: B125_contig_342_35
Type: pfam
Location: 32668 - 34020 (-)
Type: pfam
Location: 32668 - 34020 (-)
Gene ID: B125_contig_342_36
Type: CAZyme
Location: 34193 - 36574 (+)
Type: CAZyme
Location: 34193 - 36574 (+)
Gene ID: B125_contig_342_37
Type: pfam
Location: 36783 - 37211 (+)
Type: pfam
Location: 36783 - 37211 (+)
Gene ID: B125_contig_342_38
Type: pfam
Location: 37225 - 38202 (+)
Type: pfam
Location: 37225 - 38202 (+)
Gene ID: B125_contig_342_39
Type: CAZyme
Location: 38240 - 39343 (+)
Type: CAZyme
Location: 38240 - 39343 (+)
Gene ID: B125_contig_342_40
Type: CAZyme
Location: 39429 - 40499 (+)
Type: CAZyme
Location: 39429 - 40499 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.