Cluster: B125.bin_9_CGC36
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_00871
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B125_contig_44 | B125_contig_44_1229 | 1384480 | 1386285 | + | GH43_28 |
| CAZyme | B125_contig_44 | B125_contig_44_1230 | 1386392 | 1388635 | + | GH3 |
| pfam | B125_contig_44 | B125_contig_44_1231 | 1388755 | 1390272 | + | MFS_2 |
| CAZyme | B125_contig_44 | B125_contig_44_1232 | 1390353 | 1392923 | + | CBM67 | GH78 |
| TF | B125_contig_44 | B125_contig_44_1233 | 1393007 | 1394212 | + | HTH_AraC |
| CAZyme | B125_contig_44 | B125_contig_44_1234 | 1394368 | 1396593 | + | GH2 |
| CAZyme | B125_contig_44 | B125_contig_44_1235 | 1396678 | 1398000 | + | GH1 |
| TC | B125_contig_44 | B125_contig_44_1236 | 1398073 | 1399437 | - | 2.A.66.1.13 |
| STP | B125_contig_44 | B125_contig_44_1237 | 1399542 | 1400090 | + | TetR_N |
| CAZyme | B125_contig_44 | B125_contig_44_1238 | 1400483 | 1403272 | + | CBM67 | GH78 |
| CAZyme | B125_contig_44 | B125_contig_44_1239 | 1403367 | 1405640 | + | GH3 |
| TC | B125_contig_44 | B125_contig_44_1240 | 1405665 | 1407092 | + | 2.A.2.3.5 |
| TF | B125_contig_44 | B125_contig_44_1241 | 1407194 | 1408423 | - | HTH_AraC | HTH_AraC |
| CAZyme | B125_contig_44 | B125_contig_44_1242 | 1408600 | 1411368 | + | CBM67 | GH78 |
| peptidase | B125_contig_44 | B125_contig_44_1243 | 1411418 | 1412326 | + | S09.UNW |
| peptidase | B125_contig_44 | B125_contig_44_1244 | 1412353 | 1413339 | + | S09.UPW |
| CAZyme | B125_contig_44 | B125_contig_44_1245 | 1413373 | 1414881 | + | GH43_35 |
Gene ID: B125_contig_44_1229
Type: CAZyme
Location: 1384480 - 1386285 (+)
Type: CAZyme
Location: 1384480 - 1386285 (+)
Gene ID: B125_contig_44_1230
Type: CAZyme
Location: 1386392 - 1388635 (+)
Type: CAZyme
Location: 1386392 - 1388635 (+)
Gene ID: B125_contig_44_1231
Type: pfam
Location: 1388755 - 1390272 (+)
Type: pfam
Location: 1388755 - 1390272 (+)
Gene ID: B125_contig_44_1232
Type: CAZyme
Location: 1390353 - 1392923 (+)
Type: CAZyme
Location: 1390353 - 1392923 (+)
Gene ID: B125_contig_44_1233
Type: TF
Location: 1393007 - 1394212 (+)
Type: TF
Location: 1393007 - 1394212 (+)
Gene ID: B125_contig_44_1234
Type: CAZyme
Location: 1394368 - 1396593 (+)
Type: CAZyme
Location: 1394368 - 1396593 (+)
Gene ID: B125_contig_44_1235
Type: CAZyme
Location: 1396678 - 1398000 (+)
Type: CAZyme
Location: 1396678 - 1398000 (+)
Gene ID: B125_contig_44_1236
Type: TC
Location: 1398073 - 1399437 (-)
Type: TC
Location: 1398073 - 1399437 (-)
Gene ID: B125_contig_44_1237
Type: STP
Location: 1399542 - 1400090 (+)
Type: STP
Location: 1399542 - 1400090 (+)
Gene ID: B125_contig_44_1238
Type: CAZyme
Location: 1400483 - 1403272 (+)
Type: CAZyme
Location: 1400483 - 1403272 (+)
Gene ID: B125_contig_44_1239
Type: CAZyme
Location: 1403367 - 1405640 (+)
Type: CAZyme
Location: 1403367 - 1405640 (+)
Gene ID: B125_contig_44_1240
Type: TC
Location: 1405665 - 1407092 (+)
Type: TC
Location: 1405665 - 1407092 (+)
Gene ID: B125_contig_44_1241
Type: TF
Location: 1407194 - 1408423 (-)
Type: TF
Location: 1407194 - 1408423 (-)
Gene ID: B125_contig_44_1242
Type: CAZyme
Location: 1408600 - 1411368 (+)
Type: CAZyme
Location: 1408600 - 1411368 (+)
Gene ID: B125_contig_44_1243
Type: peptidase
Location: 1411418 - 1412326 (+)
Type: peptidase
Location: 1411418 - 1412326 (+)
Gene ID: B125_contig_44_1244
Type: peptidase
Location: 1412353 - 1413339 (+)
Type: peptidase
Location: 1412353 - 1413339 (+)
Gene ID: B125_contig_44_1245
Type: CAZyme
Location: 1413373 - 1414881 (+)
Type: CAZyme
Location: 1413373 - 1414881 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.