Cluster: B125.bin_9_CGC34
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_06756
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_44 | B125_contig_44_1015 | 1138507 | 1139286 | - | 3.A.1.124.3 |
| TF | B125_contig_44 | B125_contig_44_1016 | 1139516 | 1140223 | + | Trans_reg_C |
| STP | B125_contig_44 | B125_contig_44_1017 | 1140259 | 1141680 | + | HATPase_c | HisKA |
| CAZyme | B125_contig_44 | B125_contig_44_1018 | 1141670 | 1143799 | + | GH13_11 |
| pfam | B125_contig_44 | B125_contig_44_1019 | 1143849 | 1144943 | + | CbiG_C | CbiG_N | CbiG_mid |
| pfam | B125_contig_44 | B125_contig_44_1020 | 1144952 | 1145701 | + | CbiJ |
| TC | B125_contig_44 | B125_contig_44_1021 | 1146135 | 1146881 | + | 3.A.1.23.8 |
| pfam | B125_contig_44 | B125_contig_44_1022 | 1146887 | 1147201 | + | CbiN |
| TC | B125_contig_44 | B125_contig_44_1023 | 1147207 | 1147974 | + | 3.A.1.23.6 |
| TC | B125_contig_44 | B125_contig_44_1024 | 1147962 | 1148819 | + | 3.A.1.23.8 |
Gene ID: B125_contig_44_1015
Type: TC
Location: 1138507 - 1139286 (-)
Type: TC
Location: 1138507 - 1139286 (-)
Gene ID: B125_contig_44_1016
Type: TF
Location: 1139516 - 1140223 (+)
Type: TF
Location: 1139516 - 1140223 (+)
Gene ID: B125_contig_44_1017
Type: STP
Location: 1140259 - 1141680 (+)
Type: STP
Location: 1140259 - 1141680 (+)
Gene ID: B125_contig_44_1018
Type: CAZyme
Location: 1141670 - 1143799 (+)
Type: CAZyme
Location: 1141670 - 1143799 (+)
Gene ID: B125_contig_44_1019
Type: pfam
Location: 1143849 - 1144943 (+)
Type: pfam
Location: 1143849 - 1144943 (+)
Gene ID: B125_contig_44_1020
Type: pfam
Location: 1144952 - 1145701 (+)
Type: pfam
Location: 1144952 - 1145701 (+)
Gene ID: B125_contig_44_1021
Type: TC
Location: 1146135 - 1146881 (+)
Type: TC
Location: 1146135 - 1146881 (+)
Gene ID: B125_contig_44_1022
Type: pfam
Location: 1146887 - 1147201 (+)
Type: pfam
Location: 1146887 - 1147201 (+)
Gene ID: B125_contig_44_1023
Type: TC
Location: 1147207 - 1147974 (+)
Type: TC
Location: 1147207 - 1147974 (+)
Gene ID: B125_contig_44_1024
Type: TC
Location: 1147962 - 1148819 (+)
Type: TC
Location: 1147962 - 1148819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.