dbCAN Logo

Cluster: B125.bin_9_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B125_contig_44 B125_contig_44_528 589059 589880 + CE1
pfam B125_contig_44 B125_contig_44_529 589914 591188 + Na_sulph_symp | CitMHS
pfam B125_contig_44 B125_contig_44_530 591345 592760 + Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_2 | Choline_bind_3 | Choline_bind_3
CAZyme B125_contig_44 B125_contig_44_531 592778 595171 + GH39
NULL(UNKNOWN) B125_contig_44 B125_contig_44_532 595307 595462 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B125_contig_44 B125_contig_44_533 595459 596421 + FMN_red
TC B125_contig_44 B125_contig_44_534 596449 597867 + 2.A.2.3.2
TF B125_contig_44 B125_contig_44_535 598078 598383 + HTH_5
TC B125_contig_44 B125_contig_44_536 598461 599474 + 2.A.119.1.3
Gene ID: B125_contig_44_528
Type: CAZyme
Location: 589059 - 589880 (+)
Gene ID: B125_contig_44_529
Type: pfam
Location: 589914 - 591188 (+)
Gene ID: B125_contig_44_530
Type: pfam
Location: 591345 - 592760 (+)
Gene ID: B125_contig_44_531
Type: CAZyme
Location: 592778 - 595171 (+)
Gene ID: B125_contig_44_532
Type:
Location: 595307 - 595462 (+)
Gene ID: B125_contig_44_533
Type: pfam
Location: 595459 - 596421 (+)
Gene ID: B125_contig_44_534
Type: TC
Location: 596449 - 597867 (+)
Gene ID: B125_contig_44_535
Type: TF
Location: 598078 - 598383 (+)
Gene ID: B125_contig_44_536
Type: TC
Location: 598461 - 599474 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List