Cluster: B125.bin_9_CGC23
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_03051
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B125_contig_44 | B125_contig_44_501 | 550760 | 553324 | + | GH3 |
| TC | B125_contig_44 | B125_contig_44_502 | 553521 | 554900 | + | 2.A.2.3.3 |
| CAZyme | B125_contig_44 | B125_contig_44_503 | 555038 | 557440 | + | GH39 |
| CAZyme | B125_contig_44 | B125_contig_44_504 | 557546 | 559954 | + | GH39 |
| CAZyme | B125_contig_44 | B125_contig_44_505 | 560083 | 562452 | + | GH39 |
| TC | B125_contig_44 | B125_contig_44_506 | 562624 | 563973 | + | 2.A.2.3.2 |
| peptidase | B125_contig_44 | B125_contig_44_507 | 564059 | 565396 | + | S09.UPW |
| pfam | B125_contig_44 | B125_contig_44_508 | 565601 | 566521 | + | AP_endonuc_2 |
| CAZyme | B125_contig_44 | B125_contig_44_509 | 566715 | 567827 | + | GH179 |
| pfam | B125_contig_44 | B125_contig_44_510 | 567997 | 568392 | + | CGDB |
| NULL(UNKNOWN) | B125_contig_44 | B125_contig_44_511 | 568406 | 569464 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B125_contig_44 | B125_contig_44_512 | 569495 | 570544 | + | GH179 |
Gene ID: B125_contig_44_501
Type: CAZyme
Location: 550760 - 553324 (+)
Type: CAZyme
Location: 550760 - 553324 (+)
Gene ID: B125_contig_44_502
Type: TC
Location: 553521 - 554900 (+)
Type: TC
Location: 553521 - 554900 (+)
Gene ID: B125_contig_44_503
Type: CAZyme
Location: 555038 - 557440 (+)
Type: CAZyme
Location: 555038 - 557440 (+)
Gene ID: B125_contig_44_504
Type: CAZyme
Location: 557546 - 559954 (+)
Type: CAZyme
Location: 557546 - 559954 (+)
Gene ID: B125_contig_44_505
Type: CAZyme
Location: 560083 - 562452 (+)
Type: CAZyme
Location: 560083 - 562452 (+)
Gene ID: B125_contig_44_506
Type: TC
Location: 562624 - 563973 (+)
Type: TC
Location: 562624 - 563973 (+)
Gene ID: B125_contig_44_507
Type: peptidase
Location: 564059 - 565396 (+)
Type: peptidase
Location: 564059 - 565396 (+)
Gene ID: B125_contig_44_508
Type: pfam
Location: 565601 - 566521 (+)
Type: pfam
Location: 565601 - 566521 (+)
Gene ID: B125_contig_44_509
Type: CAZyme
Location: 566715 - 567827 (+)
Type: CAZyme
Location: 566715 - 567827 (+)
Gene ID: B125_contig_44_510
Type: pfam
Location: 567997 - 568392 (+)
Type: pfam
Location: 567997 - 568392 (+)
Gene ID: B125_contig_44_511
Type:
Location: 568406 - 569464 (+)
Type:
Location: 568406 - 569464 (+)
Gene ID: B125_contig_44_512
Type: CAZyme
Location: 569495 - 570544 (+)
Type: CAZyme
Location: 569495 - 570544 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.