Cluster: B125.bin_9_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_07415
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_44 | B125_contig_44_385 | 438938 | 439894 | + | 3.A.1.1.11 |
| TC | B125_contig_44 | B125_contig_44_386 | 439909 | 440751 | + | 3.A.1.1.11 |
| CAZyme | B125_contig_44 | B125_contig_44_387 | 440791 | 442374 | + | CBM91 | GH43_11 |
| CAZyme | B125_contig_44 | B125_contig_44_388 | 442371 | 443756 | + | GH63 |
| TF | B125_contig_44 | B125_contig_44_389 | 443795 | 444715 | - | HTH_AraC | HTH_AraC |
| CAZyme | B125_contig_44 | B125_contig_44_390 | 444932 | 446332 | + | GH4 |
Gene ID: B125_contig_44_385
Type: TC
Location: 438938 - 439894 (+)
Type: TC
Location: 438938 - 439894 (+)
Gene ID: B125_contig_44_386
Type: TC
Location: 439909 - 440751 (+)
Type: TC
Location: 439909 - 440751 (+)
Gene ID: B125_contig_44_387
Type: CAZyme
Location: 440791 - 442374 (+)
Type: CAZyme
Location: 440791 - 442374 (+)
Gene ID: B125_contig_44_388
Type: CAZyme
Location: 442371 - 443756 (+)
Type: CAZyme
Location: 442371 - 443756 (+)
Gene ID: B125_contig_44_389
Type: TF
Location: 443795 - 444715 (-)
Type: TF
Location: 443795 - 444715 (-)
Gene ID: B125_contig_44_390
Type: CAZyme
Location: 444932 - 446332 (+)
Type: CAZyme
Location: 444932 - 446332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.