Cluster: B125.bin_9_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 6
- Substrate:
- Genome ID: B125.bin_9
- CGC Family ID: CGCFAM_00206
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_44 | B125_contig_44_145 | 173358 | 174728 | + | 2.A.2.3.3 |
| CAZyme | B125_contig_44 | B125_contig_44_146 | 174733 | 175800 | + | GH43_24 |
| CAZyme | B125_contig_44 | B125_contig_44_147 | 175886 | 178171 | - | GH3 |
| CAZyme | B125_contig_44 | B125_contig_44_148 | 178394 | 180964 | + | CBM67 | GH78 |
| CAZyme | B125_contig_44 | B125_contig_44_149 | 181001 | 183430 | + | GH2 |
| TC | B125_contig_44 | B125_contig_44_150 | 183671 | 185065 | + | 2.A.2.3.3 |
| NULL(UNKNOWN) | B125_contig_44 | B125_contig_44_151 | 185223 | 185621 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | B125_contig_44 | B125_contig_44_152 | 185714 | 186853 | - | HTH_AraC |
| CAZyme | B125_contig_44 | B125_contig_44_153 | 187208 | 188896 | + | GH3 |
| CAZyme | B125_contig_44 | B125_contig_44_154 | 188935 | 191745 | + | GH78 |
Gene ID: B125_contig_44_145
Type: TC
Location: 173358 - 174728 (+)
Type: TC
Location: 173358 - 174728 (+)
Gene ID: B125_contig_44_146
Type: CAZyme
Location: 174733 - 175800 (+)
Type: CAZyme
Location: 174733 - 175800 (+)
Gene ID: B125_contig_44_147
Type: CAZyme
Location: 175886 - 178171 (-)
Type: CAZyme
Location: 175886 - 178171 (-)
Gene ID: B125_contig_44_148
Type: CAZyme
Location: 178394 - 180964 (+)
Type: CAZyme
Location: 178394 - 180964 (+)
Gene ID: B125_contig_44_149
Type: CAZyme
Location: 181001 - 183430 (+)
Type: CAZyme
Location: 181001 - 183430 (+)
Gene ID: B125_contig_44_150
Type: TC
Location: 183671 - 185065 (+)
Type: TC
Location: 183671 - 185065 (+)
Gene ID: B125_contig_44_151
Type:
Location: 185223 - 185621 (+)
Type:
Location: 185223 - 185621 (+)
Gene ID: B125_contig_44_152
Type: TF
Location: 185714 - 186853 (-)
Type: TF
Location: 185714 - 186853 (-)
Gene ID: B125_contig_44_153
Type: CAZyme
Location: 187208 - 188896 (+)
Type: CAZyme
Location: 187208 - 188896 (+)
Gene ID: B125_contig_44_154
Type: CAZyme
Location: 188935 - 191745 (+)
Type: CAZyme
Location: 188935 - 191745 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.