Cluster: B125.bin_9_CGC11
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: B125.bin_9
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B125_contig_44 | B125_contig_44_113 | 127357 | 130137 | + | CBM67 | GH78 |
| CAZyme | B125_contig_44 | B125_contig_44_114 | 130159 | 132447 | + | GH3 |
| TC | B125_contig_44 | B125_contig_44_115 | 132451 | 133806 | + | 2.A.2.1.1 |
| pfam | B125_contig_44 | B125_contig_44_116 | 134113 | 135105 | + | Fic | Fic-like_C |
| CAZyme | B125_contig_44 | B125_contig_44_117 | 135230 | 137533 | + | CBM67 | GH78 |
| TF | B125_contig_44 | B125_contig_44_118 | 137530 | 138591 | - | HTH_AraC |
| CAZyme | B125_contig_44 | B125_contig_44_119 | 138723 | 140108 | + | GH43_2 |
| STP | B125_contig_44 | B125_contig_44_120 | 140266 | 140568 | + | NTP_transf_2 |
| pfam | B125_contig_44 | B125_contig_44_121 | 140555 | 140959 | + | NTase_sub_bind |
| CAZyme | B125_contig_44 | B125_contig_44_122 | 141050 | 142330 | + | CBM50 |
Gene ID: B125_contig_44_113
Type: CAZyme
Location: 127357 - 130137 (+)
Type: CAZyme
Location: 127357 - 130137 (+)
Gene ID: B125_contig_44_114
Type: CAZyme
Location: 130159 - 132447 (+)
Type: CAZyme
Location: 130159 - 132447 (+)
Gene ID: B125_contig_44_115
Type: TC
Location: 132451 - 133806 (+)
Type: TC
Location: 132451 - 133806 (+)
Gene ID: B125_contig_44_116
Type: pfam
Location: 134113 - 135105 (+)
Type: pfam
Location: 134113 - 135105 (+)
Gene ID: B125_contig_44_117
Type: CAZyme
Location: 135230 - 137533 (+)
Type: CAZyme
Location: 135230 - 137533 (+)
Gene ID: B125_contig_44_118
Type: TF
Location: 137530 - 138591 (-)
Type: TF
Location: 137530 - 138591 (-)
Gene ID: B125_contig_44_119
Type: CAZyme
Location: 138723 - 140108 (+)
Type: CAZyme
Location: 138723 - 140108 (+)
Gene ID: B125_contig_44_120
Type: STP
Location: 140266 - 140568 (+)
Type: STP
Location: 140266 - 140568 (+)
Gene ID: B125_contig_44_121
Type: pfam
Location: 140555 - 140959 (+)
Type: pfam
Location: 140555 - 140959 (+)
Gene ID: B125_contig_44_122
Type: CAZyme
Location: 141050 - 142330 (+)
Type: CAZyme
Location: 141050 - 142330 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Schaedlerella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.