Cluster: B125.bin_6_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: B125.bin_6
- CGC Family ID: CGCFAM_00563
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B125_contig_959 | B125_contig_959_141 | 167155 | 168153 | + | GT8 |
| CAZyme | B125_contig_959 | B125_contig_959_142 | 168173 | 169144 | + | GT2 |
| CAZyme | B125_contig_959 | B125_contig_959_143 | 169141 | 170025 | + | GT2 |
| peptidase | B125_contig_959 | B125_contig_959_144 | 170098 | 171777 | - | C82.UNA |
| CAZyme | B125_contig_959 | B125_contig_959_145 | 171939 | 172919 | + | GT2 |
| TC | B125_contig_959 | B125_contig_959_146 | 172943 | 174388 | + | 2.A.66.2.23 |
| pfam | B125_contig_959 | B125_contig_959_147 | 174390 | 175427 | + | ATP-grasp_3 | ATPgrasp_Ter | PylC-like_N |
| STP | B125_contig_959 | B125_contig_959_148 | 175420 | 176547 | + | Aminotran_1_2 |
| CAZyme | B125_contig_959 | B125_contig_959_149 | 176544 | 177236 | + | GT2 |
| NULL(UNKNOWN) | B125_contig_959 | B125_contig_959_150 | 177241 | 178539 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B125_contig_959 | B125_contig_959_151 | 178529 | 179473 | + | GT2 |
Gene ID: B125_contig_959_141
Type: CAZyme
Location: 167155 - 168153 (+)
Type: CAZyme
Location: 167155 - 168153 (+)
Gene ID: B125_contig_959_142
Type: CAZyme
Location: 168173 - 169144 (+)
Type: CAZyme
Location: 168173 - 169144 (+)
Gene ID: B125_contig_959_143
Type: CAZyme
Location: 169141 - 170025 (+)
Type: CAZyme
Location: 169141 - 170025 (+)
Gene ID: B125_contig_959_144
Type: peptidase
Location: 170098 - 171777 (-)
Type: peptidase
Location: 170098 - 171777 (-)
Gene ID: B125_contig_959_145
Type: CAZyme
Location: 171939 - 172919 (+)
Type: CAZyme
Location: 171939 - 172919 (+)
Gene ID: B125_contig_959_146
Type: TC
Location: 172943 - 174388 (+)
Type: TC
Location: 172943 - 174388 (+)
Gene ID: B125_contig_959_147
Type: pfam
Location: 174390 - 175427 (+)
Type: pfam
Location: 174390 - 175427 (+)
Gene ID: B125_contig_959_148
Type: STP
Location: 175420 - 176547 (+)
Type: STP
Location: 175420 - 176547 (+)
Gene ID: B125_contig_959_149
Type: CAZyme
Location: 176544 - 177236 (+)
Type: CAZyme
Location: 176544 - 177236 (+)
Gene ID: B125_contig_959_150
Type:
Location: 177241 - 178539 (+)
Type:
Location: 177241 - 178539 (+)
Gene ID: B125_contig_959_151
Type: CAZyme
Location: 178529 - 179473 (+)
Type: CAZyme
Location: 178529 - 179473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp900538475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.