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Cluster: B125.bin_6_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B125_contig_1522 B125_contig_1522_235 229263 231518 + GT35
NULL(UNKNOWN) B125_contig_1522 B125_contig_1522_236 232015 232338 - NULL(UNKNOWN)
[View Structural Homologs]
TF B125_contig_1522 B125_contig_1522_237 232452 232790 - PadR
TC B125_contig_1522 B125_contig_1522_238 233051 233920 + 2.A.115.1.5
TC B125_contig_1522 B125_contig_1522_239 234008 234811 + 3.A.1.17.3
pfam B125_contig_1522 B125_contig_1522_240 234967 236454 + His_kinase
STP B125_contig_1522 B125_contig_1522_241 236442 237665 + Response_reg
TC B125_contig_1522 B125_contig_1522_242 237686 238723 + 2.A.56.1.5
pfam B125_contig_1522 B125_contig_1522_243 238843 239928 + PMI_typeI_cat | MPI_cupin_dom
TC B125_contig_1522 B125_contig_1522_244 240109 241155 + 2.A.56.1.8
pfam B125_contig_1522 B125_contig_1522_245 241210 241692 + DctQ
TC B125_contig_1522 B125_contig_1522_246 241692 242978 + 2.A.56.1.6
TF B125_contig_1522 B125_contig_1522_247 243078 244088 - LacI
TC B125_contig_1522 B125_contig_1522_248 244374 245414 + 2.A.56.1.8
pfam B125_contig_1522 B125_contig_1522_249 245529 246005 + DctQ
TC B125_contig_1522 B125_contig_1522_250 246005 247294 + 2.A.56.1.6
TF B125_contig_1522 B125_contig_1522_251 247321 248742 - HTH_8
pfam B125_contig_1522 B125_contig_1522_252 249042 250619 + CoA_trans
TC B125_contig_1522 B125_contig_1522_253 250624 251997 + 2.A.8.1.13
sulfatase B125_contig_1522 B125_contig_1522_254 252052 252825 + S1_8
pfam B125_contig_1522 B125_contig_1522_255 252899 253354 + MaoC_dehydratas | FAS1_DH_region
TC B125_contig_1522 B125_contig_1522_256 253542 254303 - 3.A.1.17.8
Gene ID: B125_contig_1522_235
Type: CAZyme
Location: 229263 - 231518 (+)
Gene ID: B125_contig_1522_236
Type:
Location: 232015 - 232338 (-)
Gene ID: B125_contig_1522_237
Type: TF
Location: 232452 - 232790 (-)
Gene ID: B125_contig_1522_238
Type: TC
Location: 233051 - 233920 (+)
Gene ID: B125_contig_1522_239
Type: TC
Location: 234008 - 234811 (+)
Gene ID: B125_contig_1522_240
Type: pfam
Location: 234967 - 236454 (+)
Gene ID: B125_contig_1522_241
Type: STP
Location: 236442 - 237665 (+)
Gene ID: B125_contig_1522_242
Type: TC
Location: 237686 - 238723 (+)
Gene ID: B125_contig_1522_243
Type: pfam
Location: 238843 - 239928 (+)
Gene ID: B125_contig_1522_244
Type: TC
Location: 240109 - 241155 (+)
Gene ID: B125_contig_1522_245
Type: pfam
Location: 241210 - 241692 (+)
Gene ID: B125_contig_1522_246
Type: TC
Location: 241692 - 242978 (+)
Gene ID: B125_contig_1522_247
Type: TF
Location: 243078 - 244088 (-)
Gene ID: B125_contig_1522_248
Type: TC
Location: 244374 - 245414 (+)
Gene ID: B125_contig_1522_249
Type: pfam
Location: 245529 - 246005 (+)
Gene ID: B125_contig_1522_250
Type: TC
Location: 246005 - 247294 (+)
Gene ID: B125_contig_1522_251
Type: TF
Location: 247321 - 248742 (-)
Gene ID: B125_contig_1522_252
Type: pfam
Location: 249042 - 250619 (+)
Gene ID: B125_contig_1522_253
Type: TC
Location: 250624 - 251997 (+)
Gene ID: B125_contig_1522_254
Type: sulfatase
Location: 252052 - 252825 (+)
Gene ID: B125_contig_1522_255
Type: pfam
Location: 252899 - 253354 (+)
Gene ID: B125_contig_1522_256
Type: TC
Location: 253542 - 254303 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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