Cluster: B125.bin_6_CGC29
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: B125.bin_6
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_1073 | B125_contig_1073_230 | 264302 | 266083 | + | 8.A.59.2.1 |
| TF | B125_contig_1073 | B125_contig_1073_231 | 266076 | 266831 | + | HTH_AraC | HTH_AraC |
| NULL(UNKNOWN) | B125_contig_1073 | B125_contig_1073_232 | 266988 | 268418 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B125_contig_1073 | B125_contig_1073_233 | 268562 | 270376 | + | 3.A.1.20.2 |
| TC | B125_contig_1073 | B125_contig_1073_234 | 270403 | 272052 | + | 3.A.1.1.16 |
| TF | B125_contig_1073 | B125_contig_1073_235 | 272206 | 274206 | + | HTH_11 | Mga |
| TC | B125_contig_1073 | B125_contig_1073_236 | 274348 | 275142 | + | 4.A.6.1.19 |
| TC | B125_contig_1073 | B125_contig_1073_237 | 275142 | 275957 | + | 4.A.6.1.19 |
| CAZyme | B125_contig_1073 | B125_contig_1073_238 | 275971 | 277155 | + | CE9 |
| TC | B125_contig_1073 | B125_contig_1073_239 | 277183 | 277674 | + | 4.A.6.1.16 |
| pfam | B125_contig_1073 | B125_contig_1073_240 | 277695 | 278474 | + | YdjC |
| pfam | B125_contig_1073 | B125_contig_1073_241 | 278500 | 278916 | + | EIIA-man |
| TC | B125_contig_1073 | B125_contig_1073_242 | 278900 | 279547 | + | 9.B.143.2.2 |
Gene ID: B125_contig_1073_230
Type: TC
Location: 264302 - 266083 (+)
Type: TC
Location: 264302 - 266083 (+)
Gene ID: B125_contig_1073_231
Type: TF
Location: 266076 - 266831 (+)
Type: TF
Location: 266076 - 266831 (+)
Gene ID: B125_contig_1073_232
Type:
Location: 266988 - 268418 (+)
Type:
Location: 266988 - 268418 (+)
Gene ID: B125_contig_1073_233
Type: TC
Location: 268562 - 270376 (+)
Type: TC
Location: 268562 - 270376 (+)
Gene ID: B125_contig_1073_234
Type: TC
Location: 270403 - 272052 (+)
Type: TC
Location: 270403 - 272052 (+)
Gene ID: B125_contig_1073_235
Type: TF
Location: 272206 - 274206 (+)
Type: TF
Location: 272206 - 274206 (+)
Gene ID: B125_contig_1073_236
Type: TC
Location: 274348 - 275142 (+)
Type: TC
Location: 274348 - 275142 (+)
Gene ID: B125_contig_1073_237
Type: TC
Location: 275142 - 275957 (+)
Type: TC
Location: 275142 - 275957 (+)
Gene ID: B125_contig_1073_238
Type: CAZyme
Location: 275971 - 277155 (+)
Type: CAZyme
Location: 275971 - 277155 (+)
Gene ID: B125_contig_1073_239
Type: TC
Location: 277183 - 277674 (+)
Type: TC
Location: 277183 - 277674 (+)
Gene ID: B125_contig_1073_240
Type: pfam
Location: 277695 - 278474 (+)
Type: pfam
Location: 277695 - 278474 (+)
Gene ID: B125_contig_1073_241
Type: pfam
Location: 278500 - 278916 (+)
Type: pfam
Location: 278500 - 278916 (+)
Gene ID: B125_contig_1073_242
Type: TC
Location: 278900 - 279547 (+)
Type: TC
Location: 278900 - 279547 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp900538475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.