Cluster: B125.bin_6_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: B125.bin_6
- CGC Family ID: CGCFAM_04894
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_1671 | B125_contig_1671_227 | 274328 | 275290 | + | 3.A.1.105.9 |
| TC | B125_contig_1671 | B125_contig_1671_228 | 275268 | 276158 | + | 3.A.1.132.7 |
| CAZyme | B125_contig_1671 | B125_contig_1671_229 | 276328 | 278829 | + | CBM48 | GH13_9 |
| STP | B125_contig_1671 | B125_contig_1671_230 | 279274 | 280377 | + | SBP_bac_1 |
| TC | B125_contig_1671 | B125_contig_1671_231 | 280420 | 281424 | + | 3.A.1.1.16 |
| TC | B125_contig_1671 | B125_contig_1671_232 | 281440 | 283203 | + | 3.A.1.11.5 |
Gene ID: B125_contig_1671_227
Type: TC
Location: 274328 - 275290 (+)
Type: TC
Location: 274328 - 275290 (+)
Gene ID: B125_contig_1671_228
Type: TC
Location: 275268 - 276158 (+)
Type: TC
Location: 275268 - 276158 (+)
Gene ID: B125_contig_1671_229
Type: CAZyme
Location: 276328 - 278829 (+)
Type: CAZyme
Location: 276328 - 278829 (+)
Gene ID: B125_contig_1671_230
Type: STP
Location: 279274 - 280377 (+)
Type: STP
Location: 279274 - 280377 (+)
Gene ID: B125_contig_1671_231
Type: TC
Location: 280420 - 281424 (+)
Type: TC
Location: 280420 - 281424 (+)
Gene ID: B125_contig_1671_232
Type: TC
Location: 281440 - 283203 (+)
Type: TC
Location: 281440 - 283203 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp900538475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.