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Cluster: B125.bin_6_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B125_contig_772 B125_contig_772_35 33716 34360 + 2.A.115.2.14
CAZyme B125_contig_772 B125_contig_772_36 34367 36304 - PL33_1
TF B125_contig_772 B125_contig_772_37 36317 37936 - HTH_AraC | HTH_AraC
TC B125_contig_772 B125_contig_772_38 37933 39804 - 8.A.59.2.1
STP B125_contig_772 B125_contig_772_39 40059 41411 + SBP_bac_1
TC B125_contig_772 B125_contig_772_40 41524 42597 + 3.A.1.1.34
TC B125_contig_772 B125_contig_772_41 42610 43446 + 3.A.1.1.11
CAZyme B125_contig_772 B125_contig_772_42 43465 44649 + GH88
CAZyme B125_contig_772 B125_contig_772_43 44709 46733 + PL12_1
pfam B125_contig_772 B125_contig_772_44 46904 47500 + AAA_28
STP B125_contig_772 B125_contig_772_45 47497 48135 + HhH-GPD
CAZyme B125_contig_772 B125_contig_772_46 48237 50063 + GH2
NULL(UNKNOWN) B125_contig_772 B125_contig_772_47 50102 50914 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B125_contig_772 B125_contig_772_48 51080 52507 - FtsJ | NTPase_1 | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31
TC B125_contig_772 B125_contig_772_49 52504 53307 - 3.A.1.14.11
TC B125_contig_772 B125_contig_772_50 53291 54349 - 3.A.1.14.11
Gene ID: B125_contig_772_35
Type: TC
Location: 33716 - 34360 (+)
Gene ID: B125_contig_772_36
Type: CAZyme
Location: 34367 - 36304 (-)
Gene ID: B125_contig_772_37
Type: TF
Location: 36317 - 37936 (-)
Gene ID: B125_contig_772_38
Type: TC
Location: 37933 - 39804 (-)
Gene ID: B125_contig_772_39
Type: STP
Location: 40059 - 41411 (+)
Gene ID: B125_contig_772_40
Type: TC
Location: 41524 - 42597 (+)
Gene ID: B125_contig_772_41
Type: TC
Location: 42610 - 43446 (+)
Gene ID: B125_contig_772_42
Type: CAZyme
Location: 43465 - 44649 (+)
Gene ID: B125_contig_772_43
Type: CAZyme
Location: 44709 - 46733 (+)
Gene ID: B125_contig_772_44
Type: pfam
Location: 46904 - 47500 (+)
Gene ID: B125_contig_772_45
Type: STP
Location: 47497 - 48135 (+)
Gene ID: B125_contig_772_46
Type: CAZyme
Location: 48237 - 50063 (+)
Gene ID: B125_contig_772_47
Type:
Location: 50102 - 50914 (+)
Gene ID: B125_contig_772_48
Type: pfam
Location: 51080 - 52507 (-)
Gene ID: B125_contig_772_49
Type: TC
Location: 52504 - 53307 (-)
Gene ID: B125_contig_772_50
Type: TC
Location: 53291 - 54349 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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