Cluster: B125.bin_6_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: B125.bin_6
- CGC Family ID: CGCFAM_04893
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B125_contig_637 | B125_contig_637_146 | 166401 | 166577 | - | 1.E.52.1.1 |
| NULL(UNKNOWN) | B125_contig_637 | B125_contig_637_147 | 166591 | 167814 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B125_contig_637 | B125_contig_637_148 | 167844 | 168563 | - | T2SSF |
| TC | B125_contig_637 | B125_contig_637_149 | 168574 | 169761 | - | 9.A.47.2.1 |
| NULL(UNKNOWN) | B125_contig_637 | B125_contig_637_150 | 169843 | 170850 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B125_contig_637 | B125_contig_637_151 | 170847 | 171293 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B125_contig_637 | B125_contig_637_152 | 171902 | 173371 | + | 4.A.1.1.7 |
| TF | B125_contig_637 | B125_contig_637_153 | 173573 | 173905 | + | HTH_5 |
| pfam | B125_contig_637 | B125_contig_637_154 | 174002 | 174238 | + | DUF2508 |
| CAZyme | B125_contig_637 | B125_contig_637_155 | 174280 | 175617 | + | GH13_20 |
| CAZyme | B125_contig_637 | B125_contig_637_156 | 175622 | 177538 | + | CBM48 | GH13_9 |
Gene ID: B125_contig_637_146
Type: TC
Location: 166401 - 166577 (-)
Type: TC
Location: 166401 - 166577 (-)
Gene ID: B125_contig_637_147
Type:
Location: 166591 - 167814 (-)
Type:
Location: 166591 - 167814 (-)
Gene ID: B125_contig_637_148
Type: pfam
Location: 167844 - 168563 (-)
Type: pfam
Location: 167844 - 168563 (-)
Gene ID: B125_contig_637_149
Type: TC
Location: 168574 - 169761 (-)
Type: TC
Location: 168574 - 169761 (-)
Gene ID: B125_contig_637_150
Type:
Location: 169843 - 170850 (-)
Type:
Location: 169843 - 170850 (-)
Gene ID: B125_contig_637_151
Type:
Location: 170847 - 171293 (-)
Type:
Location: 170847 - 171293 (-)
Gene ID: B125_contig_637_152
Type: TC
Location: 171902 - 173371 (+)
Type: TC
Location: 171902 - 173371 (+)
Gene ID: B125_contig_637_153
Type: TF
Location: 173573 - 173905 (+)
Type: TF
Location: 173573 - 173905 (+)
Gene ID: B125_contig_637_154
Type: pfam
Location: 174002 - 174238 (+)
Type: pfam
Location: 174002 - 174238 (+)
Gene ID: B125_contig_637_155
Type: CAZyme
Location: 174280 - 175617 (+)
Type: CAZyme
Location: 174280 - 175617 (+)
Gene ID: B125_contig_637_156
Type: CAZyme
Location: 175622 - 177538 (+)
Type: CAZyme
Location: 175622 - 177538 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Brotaphodocola
Species
Brotaphodocola sp900538475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.