Cluster: B112.bin_11_CGC8
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: B112.bin_11
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B112_contig_6168 | B112_contig_6168_1375 | 1469248 | 1471404 | - | 1.B.52.2.2 |
| STP | B112_contig_6168 | B112_contig_6168_1376 | 1471808 | 1473133 | - | Citrate_synt |
| TF | B112_contig_6168 | B112_contig_6168_1377 | 1473171 | 1473611 | - | MarR |
| TC | B112_contig_6168 | B112_contig_6168_1378 | 1474033 | 1475862 | + | 9.B.34.1.1 |
| pfam | B112_contig_6168 | B112_contig_6168_1379 | 1476200 | 1477723 | + | FapA | FapA_N |
| NULL(UNKNOWN) | B112_contig_6168 | B112_contig_6168_1380 | 1477799 | 1478347 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B112_contig_6168 | B112_contig_6168_1381 | 1478347 | 1481748 | + | GH2 |
| peptidase | B112_contig_6168 | B112_contig_6168_1382 | 1481956 | 1482597 | + | C40.UNW |
| TC | B112_contig_6168 | B112_contig_6168_1383 | 1483055 | 1485145 | - | 3.A.3.32.6 |
| NULL(UNKNOWN) | B112_contig_6168 | B112_contig_6168_1384 | 1485148 | 1485408 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B112_contig_6168 | B112_contig_6168_1385 | 1485558 | 1486658 | - | 3.A.1.14.8 |
| TC | B112_contig_6168 | B112_contig_6168_1386 | 1486672 | 1487697 | - | 3.A.1.13.2 |
Gene ID: B112_contig_6168_1375
Type: TC
Location: 1469248 - 1471404 (-)
Type: TC
Location: 1469248 - 1471404 (-)
Gene ID: B112_contig_6168_1376
Type: STP
Location: 1471808 - 1473133 (-)
Type: STP
Location: 1471808 - 1473133 (-)
Gene ID: B112_contig_6168_1377
Type: TF
Location: 1473171 - 1473611 (-)
Type: TF
Location: 1473171 - 1473611 (-)
Gene ID: B112_contig_6168_1378
Type: TC
Location: 1474033 - 1475862 (+)
Type: TC
Location: 1474033 - 1475862 (+)
Gene ID: B112_contig_6168_1379
Type: pfam
Location: 1476200 - 1477723 (+)
Type: pfam
Location: 1476200 - 1477723 (+)
Gene ID: B112_contig_6168_1380
Type:
Location: 1477799 - 1478347 (+)
Type:
Location: 1477799 - 1478347 (+)
Gene ID: B112_contig_6168_1381
Type: CAZyme
Location: 1478347 - 1481748 (+)
Type: CAZyme
Location: 1478347 - 1481748 (+)
Gene ID: B112_contig_6168_1382
Type: peptidase
Location: 1481956 - 1482597 (+)
Type: peptidase
Location: 1481956 - 1482597 (+)
Gene ID: B112_contig_6168_1383
Type: TC
Location: 1483055 - 1485145 (-)
Type: TC
Location: 1483055 - 1485145 (-)
Gene ID: B112_contig_6168_1384
Type:
Location: 1485148 - 1485408 (-)
Type:
Location: 1485148 - 1485408 (-)
Gene ID: B112_contig_6168_1385
Type: TC
Location: 1485558 - 1486658 (-)
Type: TC
Location: 1485558 - 1486658 (-)
Gene ID: B112_contig_6168_1386
Type: TC
Location: 1486672 - 1487697 (-)
Type: TC
Location: 1486672 - 1487697 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
CAG-115
Species
CAG-115 sp003531585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.