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Cluster: B112.bin_11_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B112_contig_6168 B112_contig_6168_799 816824 817789 + GH26
TF B112_contig_6168 B112_contig_6168_800 817823 818695 - HTH_AraC | HTH_AraC
pfam B112_contig_6168 B112_contig_6168_801 818701 819534 - SpoU_methylase
TC B112_contig_6168 B112_contig_6168_802 819536 821767 - 2.A.21.9.2
CAZyme B112_contig_6168 B112_contig_6168_803 822025 823314 + GH5_4
NULL(UNKNOWN) B112_contig_6168 B112_contig_6168_804 823362 823742 + NULL(UNKNOWN)
[View Structural Homologs]
TF B112_contig_6168 B112_contig_6168_805 824028 824888 - HTH_1
TC B112_contig_6168 B112_contig_6168_806 825032 826753 + 3.A.1.135.5
TC B112_contig_6168 B112_contig_6168_807 826754 828541 + 3.A.1.135.5
Gene ID: B112_contig_6168_799
Type: CAZyme
Location: 816824 - 817789 (+)
Gene ID: B112_contig_6168_800
Type: TF
Location: 817823 - 818695 (-)
Gene ID: B112_contig_6168_801
Type: pfam
Location: 818701 - 819534 (-)
Gene ID: B112_contig_6168_802
Type: TC
Location: 819536 - 821767 (-)
Gene ID: B112_contig_6168_803
Type: CAZyme
Location: 822025 - 823314 (+)
Gene ID: B112_contig_6168_804
Type:
Location: 823362 - 823742 (+)
Gene ID: B112_contig_6168_805
Type: TF
Location: 824028 - 824888 (-)
Gene ID: B112_contig_6168_806
Type: TC
Location: 825032 - 826753 (+)
Gene ID: B112_contig_6168_807
Type: TC
Location: 826754 - 828541 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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