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Cluster: B112.bin_11_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B112_contig_6168 B112_contig_6168_3294 3510668 3511315 + 3.A.1.3.12
TC B112_contig_6168 B112_contig_6168_3295 3511329 3512123 + 3.A.1.3.24
pfam B112_contig_6168 B112_contig_6168_3296 3512449 3514539 + Gln-synt_C | GSIII_N | Gln-synt_C-ter
TF B112_contig_6168 B112_contig_6168_3297 3515881 3516672 - HTH_AraC
CAZyme B112_contig_6168 B112_contig_6168_3298 3516822 3519404 + GH59
CAZyme B112_contig_6168 B112_contig_6168_3299 3519419 3521161 + GH35
STP B112_contig_6168 B112_contig_6168_3300 3521427 3521819 - Glyoxalase
STP B112_contig_6168 B112_contig_6168_3301 3521821 3522786 - PfkB
TC B112_contig_6168 B112_contig_6168_3302 3522779 3523801 - 2.A.2.3.1
Gene ID: B112_contig_6168_3294
Type: TC
Location: 3510668 - 3511315 (+)
Gene ID: B112_contig_6168_3295
Type: TC
Location: 3511329 - 3512123 (+)
Gene ID: B112_contig_6168_3296
Type: pfam
Location: 3512449 - 3514539 (+)
Gene ID: B112_contig_6168_3297
Type: TF
Location: 3515881 - 3516672 (-)
Gene ID: B112_contig_6168_3298
Type: CAZyme
Location: 3516822 - 3519404 (+)
Gene ID: B112_contig_6168_3299
Type: CAZyme
Location: 3519419 - 3521161 (+)
Gene ID: B112_contig_6168_3300
Type: STP
Location: 3521427 - 3521819 (-)
Gene ID: B112_contig_6168_3301
Type: STP
Location: 3521821 - 3522786 (-)
Gene ID: B112_contig_6168_3302
Type: TC
Location: 3522779 - 3523801 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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