Cluster: B111.bin_9_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_9
- CGC Family ID: CGCFAM_00039
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_375 | B111_contig_375_390 | 437384 | 438364 | - | GT2 |
| pfam | B111_contig_375 | B111_contig_375_391 | 438478 | 439500 | + | Acyl_transf_3 |
| TC | B111_contig_375 | B111_contig_375_392 | 439658 | 441061 | + | 9.B.18.1.1 |
| pfam | B111_contig_375 | B111_contig_375_393 | 441080 | 442210 | + | LytR_cpsA_psr |
| NULL(UNKNOWN) | B111_contig_375 | B111_contig_375_394 | 442194 | 443519 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_375 | B111_contig_375_395 | 443512 | 444432 | + | GT2 |
Gene ID: B111_contig_375_390
Type: CAZyme
Location: 437384 - 438364 (-)
Type: CAZyme
Location: 437384 - 438364 (-)
Gene ID: B111_contig_375_391
Type: pfam
Location: 438478 - 439500 (+)
Type: pfam
Location: 438478 - 439500 (+)
Gene ID: B111_contig_375_392
Type: TC
Location: 439658 - 441061 (+)
Type: TC
Location: 439658 - 441061 (+)
Gene ID: B111_contig_375_393
Type: pfam
Location: 441080 - 442210 (+)
Type: pfam
Location: 441080 - 442210 (+)
Gene ID: B111_contig_375_394
Type:
Location: 442194 - 443519 (+)
Type:
Location: 442194 - 443519 (+)
Gene ID: B111_contig_375_395
Type: CAZyme
Location: 443512 - 444432 (+)
Type: CAZyme
Location: 443512 - 444432 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP sp000509125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.