Cluster: B111.bin_9_CGC27
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: B111.bin_9
- CGC Family ID: CGCFAM_03402
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_105 | B111_contig_105_1386 | 1489770 | 1490906 | + | GH109 |
| pfam | B111_contig_105 | B111_contig_105_1387 | 1490920 | 1491834 | + | AP_endonuc_2 |
| TC | B111_contig_105 | B111_contig_105_1388 | 1491871 | 1492902 | + | 3.A.1.2.9 |
| TC | B111_contig_105 | B111_contig_105_1389 | 1492981 | 1494468 | + | 3.A.1.2.20 |
| TC | B111_contig_105 | B111_contig_105_1390 | 1494481 | 1495521 | + | 3.A.1.2.1 |
Gene ID: B111_contig_105_1386
Type: CAZyme
Location: 1489770 - 1490906 (+)
Type: CAZyme
Location: 1489770 - 1490906 (+)
Gene ID: B111_contig_105_1387
Type: pfam
Location: 1490920 - 1491834 (+)
Type: pfam
Location: 1490920 - 1491834 (+)
Gene ID: B111_contig_105_1388
Type: TC
Location: 1491871 - 1492902 (+)
Type: TC
Location: 1491871 - 1492902 (+)
Gene ID: B111_contig_105_1389
Type: TC
Location: 1492981 - 1494468 (+)
Type: TC
Location: 1492981 - 1494468 (+)
Gene ID: B111_contig_105_1390
Type: TC
Location: 1494481 - 1495521 (+)
Type: TC
Location: 1494481 - 1495521 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP sp000509125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.