Cluster: B111.bin_9_CGC26
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_9
- CGC Family ID: CGCFAM_07393
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_105 | B111_contig_105_1355 | 1454851 | 1456284 | + | 2.A.1.3.13 |
| STP | B111_contig_105 | B111_contig_105_1356 | 1456312 | 1458297 | + | Pyr_redox_2 |
| pfam | B111_contig_105 | B111_contig_105_1357 | 1458329 | 1458883 | + | SnoaL_4 |
| CAZyme | B111_contig_105 | B111_contig_105_1358 | 1458931 | 1460439 | - | GH77 |
| pfam | B111_contig_105 | B111_contig_105_1359 | 1460559 | 1460966 | + | PrcB_C |
| CAZyme | B111_contig_105 | B111_contig_105_1360 | 1460978 | 1462537 | + | CBM50 |
Gene ID: B111_contig_105_1355
Type: TC
Location: 1454851 - 1456284 (+)
Type: TC
Location: 1454851 - 1456284 (+)
Gene ID: B111_contig_105_1356
Type: STP
Location: 1456312 - 1458297 (+)
Type: STP
Location: 1456312 - 1458297 (+)
Gene ID: B111_contig_105_1357
Type: pfam
Location: 1458329 - 1458883 (+)
Type: pfam
Location: 1458329 - 1458883 (+)
Gene ID: B111_contig_105_1358
Type: CAZyme
Location: 1458931 - 1460439 (-)
Type: CAZyme
Location: 1458931 - 1460439 (-)
Gene ID: B111_contig_105_1359
Type: pfam
Location: 1460559 - 1460966 (+)
Type: pfam
Location: 1460559 - 1460966 (+)
Gene ID: B111_contig_105_1360
Type: CAZyme
Location: 1460978 - 1462537 (+)
Type: CAZyme
Location: 1460978 - 1462537 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP sp000509125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.