Cluster: B111.bin_9_CGC10
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: B111.bin_9
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | B111_contig_375 | B111_contig_375_1105 | 1174685 | 1175806 | - | GT4 |
| pfam | B111_contig_375 | B111_contig_375_1106 | 1175816 | 1176319 | - | Hexapep | Hexapep_2 |
| pfam | B111_contig_375 | B111_contig_375_1107 | 1176348 | 1177577 | - | Wzy_C |
| CAZyme | B111_contig_375 | B111_contig_375_1108 | 1177574 | 1178656 | - | GT4 |
| CAZyme | B111_contig_375 | B111_contig_375_1109 | 1178657 | 1179427 | - | GT2 |
| pfam | B111_contig_375 | B111_contig_375_1110 | 1179609 | 1180790 | - | DegT_DnrJ_EryC1 | DegT_DnrJ_EryC1 |
| CAZyme | B111_contig_375 | B111_contig_375_1111 | 1180780 | 1181676 | - | GT2 |
| TC | B111_contig_375 | B111_contig_375_1112 | 1181696 | 1182379 | - | 9.B.18.1.3 |
| STP | B111_contig_375 | B111_contig_375_1113 | 1182397 | 1183635 | - | Aminotran_1_2 |
| NULL(UNKNOWN) | B111_contig_375 | B111_contig_375_1114 | 1184168 | 1184293 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | B111_contig_375 | B111_contig_375_1115 | 1184445 | 1186319 | - | 9.B.18.2.1 |
Gene ID: B111_contig_375_1105
Type: CAZyme
Location: 1174685 - 1175806 (-)
Type: CAZyme
Location: 1174685 - 1175806 (-)
Gene ID: B111_contig_375_1106
Type: pfam
Location: 1175816 - 1176319 (-)
Type: pfam
Location: 1175816 - 1176319 (-)
Gene ID: B111_contig_375_1107
Type: pfam
Location: 1176348 - 1177577 (-)
Type: pfam
Location: 1176348 - 1177577 (-)
Gene ID: B111_contig_375_1108
Type: CAZyme
Location: 1177574 - 1178656 (-)
Type: CAZyme
Location: 1177574 - 1178656 (-)
Gene ID: B111_contig_375_1109
Type: CAZyme
Location: 1178657 - 1179427 (-)
Type: CAZyme
Location: 1178657 - 1179427 (-)
Gene ID: B111_contig_375_1110
Type: pfam
Location: 1179609 - 1180790 (-)
Type: pfam
Location: 1179609 - 1180790 (-)
Gene ID: B111_contig_375_1111
Type: CAZyme
Location: 1180780 - 1181676 (-)
Type: CAZyme
Location: 1180780 - 1181676 (-)
Gene ID: B111_contig_375_1112
Type: TC
Location: 1181696 - 1182379 (-)
Type: TC
Location: 1181696 - 1182379 (-)
Gene ID: B111_contig_375_1113
Type: STP
Location: 1182397 - 1183635 (-)
Type: STP
Location: 1182397 - 1183635 (-)
Gene ID: B111_contig_375_1114
Type:
Location: 1184168 - 1184293 (-)
Type:
Location: 1184168 - 1184293 (-)
Gene ID: B111_contig_375_1115
Type: TC
Location: 1184445 - 1186319 (-)
Type: TC
Location: 1184445 - 1186319 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Clostridium_AP
Species
Clostridium_AP sp000509125
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.