Cluster: B111.bin_5_CGC9
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: B111.bin_5
- CGC Family ID: CGCFAM_02948
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_1417 | B111_contig_1417_292 | 452764 | 455751 | - | 1.B.14.6.1 |
| pfam | B111_contig_1417 | B111_contig_1417_293 | 455779 | 457482 | - | SusD_RagB | SusD-like_3 |
| TC | B111_contig_1417 | B111_contig_1417_294 | 457489 | 460575 | - | 1.B.14.6.1 |
| CAZyme | B111_contig_1417 | B111_contig_1417_295 | 460803 | 462620 | - | GH35 |
| CAZyme | B111_contig_1417 | B111_contig_1417_296 | 462779 | 465166 | - | PL30 |
| NULL(UNKNOWN) | B111_contig_1417 | B111_contig_1417_297 | 465163 | 466098 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | B111_contig_1417 | B111_contig_1417_298 | 466463 | 467569 | + | Alginate_lyase |
| CAZyme | B111_contig_1417 | B111_contig_1417_299 | 467757 | 468992 | + | GH88 |
| NULL(UNKNOWN) | B111_contig_1417 | B111_contig_1417_300 | 469033 | 469920 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_1417 | B111_contig_1417_301 | 470078 | 472363 | + | GH89 |
| CAZyme | B111_contig_1417 | B111_contig_1417_302 | 472366 | 475245 | - | GH31_4 |
| TC | B111_contig_1417 | B111_contig_1417_303 | 475385 | 476956 | - | 3.D.10.1.4 |
Gene ID: B111_contig_1417_292
Type: TC
Location: 452764 - 455751 (-)
Type: TC
Location: 452764 - 455751 (-)
Gene ID: B111_contig_1417_293
Type: pfam
Location: 455779 - 457482 (-)
Type: pfam
Location: 455779 - 457482 (-)
Gene ID: B111_contig_1417_294
Type: TC
Location: 457489 - 460575 (-)
Type: TC
Location: 457489 - 460575 (-)
Gene ID: B111_contig_1417_295
Type: CAZyme
Location: 460803 - 462620 (-)
Type: CAZyme
Location: 460803 - 462620 (-)
Gene ID: B111_contig_1417_296
Type: CAZyme
Location: 462779 - 465166 (-)
Type: CAZyme
Location: 462779 - 465166 (-)
Gene ID: B111_contig_1417_297
Type:
Location: 465163 - 466098 (-)
Type:
Location: 465163 - 466098 (-)
Gene ID: B111_contig_1417_298
Type: pfam
Location: 466463 - 467569 (+)
Type: pfam
Location: 466463 - 467569 (+)
Gene ID: B111_contig_1417_299
Type: CAZyme
Location: 467757 - 468992 (+)
Type: CAZyme
Location: 467757 - 468992 (+)
Gene ID: B111_contig_1417_300
Type:
Location: 469033 - 469920 (+)
Type:
Location: 469033 - 469920 (+)
Gene ID: B111_contig_1417_301
Type: CAZyme
Location: 470078 - 472363 (+)
Type: CAZyme
Location: 470078 - 472363 (+)
Gene ID: B111_contig_1417_302
Type: CAZyme
Location: 472366 - 475245 (-)
Type: CAZyme
Location: 472366 - 475245 (-)
Gene ID: B111_contig_1417_303
Type: TC
Location: 475385 - 476956 (-)
Type: TC
Location: 475385 - 476956 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides salyersiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.