Cluster: B111.bin_5_CGC87
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_5
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_45 | B111_contig_45_1793 | 2217279 | 2217893 | - | 1.A.62.2.1 |
| pfam | B111_contig_45 | B111_contig_45_1794 | 2218000 | 2219082 | + | Epimerase_2 |
| CAZyme | B111_contig_45 | B111_contig_45_1795 | 2219100 | 2219987 | - | GT2 |
| TC | B111_contig_45 | B111_contig_45_1796 | 2220078 | 2222681 | + | 1.B.14.6.14 |
| STP | B111_contig_45 | B111_contig_45_1797 | 2223171 | 2224448 | + | AAA |
| CAZyme | B111_contig_45 | B111_contig_45_1798 | 2224486 | 2225952 | + | GH140 |
| pfam | B111_contig_45 | B111_contig_45_1799 | 2226026 | 2226982 | + | 2-Hacid_dh | 2-Hacid_dh_C |
| pfam | B111_contig_45 | B111_contig_45_1800 | 2227102 | 2228250 | - | Cyt_bd_oxida_II |
| TC | B111_contig_45 | B111_contig_45_1801 | 2228283 | 2229851 | - | 3.D.4.3.2 |
| pfam | B111_contig_45 | B111_contig_45_1802 | 2229911 | 2230138 | - | DUF4492 |
| pfam | B111_contig_45 | B111_contig_45_1803 | 2230327 | 2232648 | - | FtsX | FtsX | MacB_PCD |
| TC | B111_contig_45 | B111_contig_45_1804 | 2232662 | 2233336 | - | 3.A.1.122.2 |
Gene ID: B111_contig_45_1793
Type: TC
Location: 2217279 - 2217893 (-)
Type: TC
Location: 2217279 - 2217893 (-)
Gene ID: B111_contig_45_1794
Type: pfam
Location: 2218000 - 2219082 (+)
Type: pfam
Location: 2218000 - 2219082 (+)
Gene ID: B111_contig_45_1795
Type: CAZyme
Location: 2219100 - 2219987 (-)
Type: CAZyme
Location: 2219100 - 2219987 (-)
Gene ID: B111_contig_45_1796
Type: TC
Location: 2220078 - 2222681 (+)
Type: TC
Location: 2220078 - 2222681 (+)
Gene ID: B111_contig_45_1797
Type: STP
Location: 2223171 - 2224448 (+)
Type: STP
Location: 2223171 - 2224448 (+)
Gene ID: B111_contig_45_1798
Type: CAZyme
Location: 2224486 - 2225952 (+)
Type: CAZyme
Location: 2224486 - 2225952 (+)
Gene ID: B111_contig_45_1799
Type: pfam
Location: 2226026 - 2226982 (+)
Type: pfam
Location: 2226026 - 2226982 (+)
Gene ID: B111_contig_45_1800
Type: pfam
Location: 2227102 - 2228250 (-)
Type: pfam
Location: 2227102 - 2228250 (-)
Gene ID: B111_contig_45_1801
Type: TC
Location: 2228283 - 2229851 (-)
Type: TC
Location: 2228283 - 2229851 (-)
Gene ID: B111_contig_45_1802
Type: pfam
Location: 2229911 - 2230138 (-)
Type: pfam
Location: 2229911 - 2230138 (-)
Gene ID: B111_contig_45_1803
Type: pfam
Location: 2230327 - 2232648 (-)
Type: pfam
Location: 2230327 - 2232648 (-)
Gene ID: B111_contig_45_1804
Type: TC
Location: 2232662 - 2233336 (-)
Type: TC
Location: 2232662 - 2233336 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides salyersiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.