Cluster: B111.bin_5_CGC78
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: B111.bin_5
- CGC Family ID: CGCFAM_00667
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_45 | B111_contig_45_1283 | 1623228 | 1624985 | + | 3.A.2.3.3 |
| TC | B111_contig_45 | B111_contig_45_1284 | 1625015 | 1626334 | + | 3.A.2.3.3 |
| pfam | B111_contig_45 | B111_contig_45_1285 | 1626452 | 1627057 | + | ATP-synt_D |
| TC | B111_contig_45 | B111_contig_45_1286 | 1627054 | 1628871 | + | 3.A.2.2.2 |
| TC | B111_contig_45 | B111_contig_45_1287 | 1628916 | 1629377 | + | 3.A.2.2.2 |
| CAZyme | B111_contig_45 | B111_contig_45_1288 | 1629629 | 1631290 | + | GT3 |
| CAZyme | B111_contig_45 | B111_contig_45_1289 | 1631322 | 1633886 | + | GT35 |
| pfam | B111_contig_45 | B111_contig_45_1290 | 1633981 | 1635084 | - | Thioredoxin | AhpC-TSA | Redoxin | Thioredoxin_2 | Thioredoxin_8 | DUF4369 |
| TC | B111_contig_45 | B111_contig_45_1291 | 1635227 | 1636606 | + | 3.A.1.11.8 |
| TC | B111_contig_45 | B111_contig_45_1292 | 1636622 | 1637419 | + | 3.A.1.11.8 |
| TC | B111_contig_45 | B111_contig_45_1293 | 1637413 | 1638195 | + | 3.A.1.11.8 |
| TC | B111_contig_45 | B111_contig_45_1294 | 1638341 | 1639672 | + | 3.A.1.11.8 |
Gene ID: B111_contig_45_1283
Type: TC
Location: 1623228 - 1624985 (+)
Type: TC
Location: 1623228 - 1624985 (+)
Gene ID: B111_contig_45_1284
Type: TC
Location: 1625015 - 1626334 (+)
Type: TC
Location: 1625015 - 1626334 (+)
Gene ID: B111_contig_45_1285
Type: pfam
Location: 1626452 - 1627057 (+)
Type: pfam
Location: 1626452 - 1627057 (+)
Gene ID: B111_contig_45_1286
Type: TC
Location: 1627054 - 1628871 (+)
Type: TC
Location: 1627054 - 1628871 (+)
Gene ID: B111_contig_45_1287
Type: TC
Location: 1628916 - 1629377 (+)
Type: TC
Location: 1628916 - 1629377 (+)
Gene ID: B111_contig_45_1288
Type: CAZyme
Location: 1629629 - 1631290 (+)
Type: CAZyme
Location: 1629629 - 1631290 (+)
Gene ID: B111_contig_45_1289
Type: CAZyme
Location: 1631322 - 1633886 (+)
Type: CAZyme
Location: 1631322 - 1633886 (+)
Gene ID: B111_contig_45_1290
Type: pfam
Location: 1633981 - 1635084 (-)
Type: pfam
Location: 1633981 - 1635084 (-)
Gene ID: B111_contig_45_1291
Type: TC
Location: 1635227 - 1636606 (+)
Type: TC
Location: 1635227 - 1636606 (+)
Gene ID: B111_contig_45_1292
Type: TC
Location: 1636622 - 1637419 (+)
Type: TC
Location: 1636622 - 1637419 (+)
Gene ID: B111_contig_45_1293
Type: TC
Location: 1637413 - 1638195 (+)
Type: TC
Location: 1637413 - 1638195 (+)
Gene ID: B111_contig_45_1294
Type: TC
Location: 1638341 - 1639672 (+)
Type: TC
Location: 1638341 - 1639672 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides salyersiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.