Cluster: B111.bin_5_CGC30
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 8
- Substrate: arabinogalactan/pectin
- Genome ID: B111.bin_5
- CGC Family ID: CGCFAM_00212
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_88 | B111_contig_88_337 | 439825 | 443163 | + | 1.B.14.6.1 |
| pfam | B111_contig_88 | B111_contig_88_338 | 443178 | 445034 | + | SusD_RagB | SusD-like_3 |
| CAZyme | B111_contig_88 | B111_contig_88_339 | 445237 | 448149 | + | CE8 | PL1_2 |
| NULL(UNKNOWN) | B111_contig_88 | B111_contig_88_340 | 448250 | 449449 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_88 | B111_contig_88_341 | 449593 | 452403 | + | PL1_2 |
| NULL(UNKNOWN) | B111_contig_88 | B111_contig_88_342 | 452423 | 453913 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | B111_contig_88 | B111_contig_88_343 | 453961 | 455592 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | B111_contig_88 | B111_contig_88_344 | 455786 | 457513 | + | PL1_2 |
| pfam | B111_contig_88 | B111_contig_88_345 | 457553 | 458209 | + | DUF3826 |
| CAZyme | B111_contig_88 | B111_contig_88_346 | 458946 | 459905 | + | GH43_18 |
| CAZyme | B111_contig_88 | B111_contig_88_347 | 460042 | 463365 | + | GH142 | GH143 |
| CAZyme | B111_contig_88 | B111_contig_88_348 | 463383 | 466283 | + | CBM67 | GH78 |
| CAZyme | B111_contig_88 | B111_contig_88_349 | 466351 | 467694 | + | GH28 |
| CAZyme | B111_contig_88 | B111_contig_88_350 | 467732 | 469666 | + | CE19 |
Gene ID: B111_contig_88_337
Type: TC
Location: 439825 - 443163 (+)
Type: TC
Location: 439825 - 443163 (+)
Gene ID: B111_contig_88_338
Type: pfam
Location: 443178 - 445034 (+)
Type: pfam
Location: 443178 - 445034 (+)
Gene ID: B111_contig_88_339
Type: CAZyme
Location: 445237 - 448149 (+)
Type: CAZyme
Location: 445237 - 448149 (+)
Gene ID: B111_contig_88_340
Type:
Location: 448250 - 449449 (+)
Type:
Location: 448250 - 449449 (+)
Gene ID: B111_contig_88_341
Type: CAZyme
Location: 449593 - 452403 (+)
Type: CAZyme
Location: 449593 - 452403 (+)
Gene ID: B111_contig_88_342
Type:
Location: 452423 - 453913 (+)
Type:
Location: 452423 - 453913 (+)
Gene ID: B111_contig_88_343
Type:
Location: 453961 - 455592 (+)
Type:
Location: 453961 - 455592 (+)
Gene ID: B111_contig_88_344
Type: CAZyme
Location: 455786 - 457513 (+)
Type: CAZyme
Location: 455786 - 457513 (+)
Gene ID: B111_contig_88_345
Type: pfam
Location: 457553 - 458209 (+)
Type: pfam
Location: 457553 - 458209 (+)
Gene ID: B111_contig_88_346
Type: CAZyme
Location: 458946 - 459905 (+)
Type: CAZyme
Location: 458946 - 459905 (+)
Gene ID: B111_contig_88_347
Type: CAZyme
Location: 460042 - 463365 (+)
Type: CAZyme
Location: 460042 - 463365 (+)
Gene ID: B111_contig_88_348
Type: CAZyme
Location: 463383 - 466283 (+)
Type: CAZyme
Location: 463383 - 466283 (+)
Gene ID: B111_contig_88_349
Type: CAZyme
Location: 466351 - 467694 (+)
Type: CAZyme
Location: 466351 - 467694 (+)
Gene ID: B111_contig_88_350
Type: CAZyme
Location: 467732 - 469666 (+)
Type: CAZyme
Location: 467732 - 469666 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides salyersiae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.