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Cluster: B111.bin_5_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B111_contig_1417 B111_contig_1417_869 1232032 1234560 + CE20 | GH105
CAZyme B111_contig_1417 B111_contig_1417_870 1234573 1237338 + GH106
CAZyme B111_contig_1417 B111_contig_1417_871 1237348 1239183 + PL11
CAZyme B111_contig_1417 B111_contig_1417_872 1239253 1240782 + GH28
pfam B111_contig_1417 B111_contig_1417_873 1240878 1242341 + FGGY_N | FGGY_C
pfam B111_contig_1417 B111_contig_1417_874 1242338 1243591 + RhaA
TC B111_contig_1417 B111_contig_1417_875 1243684 1244715 + 2.A.7.6.1
pfam B111_contig_1417 B111_contig_1417_876 1244952 1245761 + Aldolase_II
CAZyme B111_contig_1417 B111_contig_1417_877 1245785 1247083 + GH105
Gene ID: B111_contig_1417_869
Type: CAZyme
Location: 1232032 - 1234560 (+)
Gene ID: B111_contig_1417_870
Type: CAZyme
Location: 1234573 - 1237338 (+)
Gene ID: B111_contig_1417_871
Type: CAZyme
Location: 1237348 - 1239183 (+)
Gene ID: B111_contig_1417_872
Type: CAZyme
Location: 1239253 - 1240782 (+)
Gene ID: B111_contig_1417_873
Type: pfam
Location: 1240878 - 1242341 (+)
Gene ID: B111_contig_1417_874
Type: pfam
Location: 1242338 - 1243591 (+)
Gene ID: B111_contig_1417_875
Type: TC
Location: 1243684 - 1244715 (+)
Gene ID: B111_contig_1417_876
Type: pfam
Location: 1244952 - 1245761 (+)
Gene ID: B111_contig_1417_877
Type: CAZyme
Location: 1245785 - 1247083 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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