Cluster: B111.bin_22_CGC14
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: B111.bin_22
- CGC Family ID: CGCFAM_00128
- Continent: Asia
- Source Study: Jin et al., 2023 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | B111_contig_5261 | B111_contig_5261_240 | 274630 | 276045 | - | 8.A.59.2.1 |
| TC | B111_contig_5261 | B111_contig_5261_241 | 276281 | 277594 | + | 2.A.2.6.2 |
| TC | B111_contig_5261 | B111_contig_5261_242 | 277641 | 280661 | + | 1.B.14.6.1 |
| TC | B111_contig_5261 | B111_contig_5261_243 | 280698 | 282341 | + | 8.A.46.1.1 |
| pfam | B111_contig_5261 | B111_contig_5261_244 | 282372 | 284321 | + | SusE |
| CAZyme | B111_contig_5261 | B111_contig_5261_245 | 284371 | 286491 | + | GH13_36 |
| CAZyme | B111_contig_5261 | B111_contig_5261_246 | 286542 | 287888 | + | GH13 |
| CAZyme | B111_contig_5261 | B111_contig_5261_247 | 287885 | 289765 | + | GH13_46 |
| CAZyme | B111_contig_5261 | B111_contig_5261_248 | 289846 | 292041 | + | GH97 |
| sulfatase | B111_contig_5261 | B111_contig_5261_249 | 292142 | 293818 | - | S1_16 |
| sulfatase | B111_contig_5261 | B111_contig_5261_250 | 294038 | 294964 | + | S1_19 |
| TC | B111_contig_5261 | B111_contig_5261_251 | 294971 | 296362 | + | 2.A.1.4.6 |
Gene ID: B111_contig_5261_240
Type: TC
Location: 274630 - 276045 (-)
Type: TC
Location: 274630 - 276045 (-)
Gene ID: B111_contig_5261_241
Type: TC
Location: 276281 - 277594 (+)
Type: TC
Location: 276281 - 277594 (+)
Gene ID: B111_contig_5261_242
Type: TC
Location: 277641 - 280661 (+)
Type: TC
Location: 277641 - 280661 (+)
Gene ID: B111_contig_5261_243
Type: TC
Location: 280698 - 282341 (+)
Type: TC
Location: 280698 - 282341 (+)
Gene ID: B111_contig_5261_244
Type: pfam
Location: 282372 - 284321 (+)
Type: pfam
Location: 282372 - 284321 (+)
Gene ID: B111_contig_5261_245
Type: CAZyme
Location: 284371 - 286491 (+)
Type: CAZyme
Location: 284371 - 286491 (+)
Gene ID: B111_contig_5261_246
Type: CAZyme
Location: 286542 - 287888 (+)
Type: CAZyme
Location: 286542 - 287888 (+)
Gene ID: B111_contig_5261_247
Type: CAZyme
Location: 287885 - 289765 (+)
Type: CAZyme
Location: 287885 - 289765 (+)
Gene ID: B111_contig_5261_248
Type: CAZyme
Location: 289846 - 292041 (+)
Type: CAZyme
Location: 289846 - 292041 (+)
Gene ID: B111_contig_5261_249
Type: sulfatase
Location: 292142 - 293818 (-)
Type: sulfatase
Location: 292142 - 293818 (-)
Gene ID: B111_contig_5261_250
Type: sulfatase
Location: 294038 - 294964 (+)
Type: sulfatase
Location: 294038 - 294964 (+)
Gene ID: B111_contig_5261_251
Type: TC
Location: 294971 - 296362 (+)
Type: TC
Location: 294971 - 296362 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes sp900548155
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.