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Cluster: B11.bin_3_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B11_contig_214 B11_contig_214_1386 1430478 1431647 - GH1
TF B11_contig_214 B11_contig_214_1387 1431647 1432471 - LacI
TC B11_contig_214 B11_contig_214_1388 1432495 1433325 - 3.A.1.1.34
TC B11_contig_214 B11_contig_214_1389 1433330 1434229 - 3.A.1.1.4
NULL(UNKNOWN) B11_contig_214 B11_contig_214_1390 1434246 1434707 - NULL(UNKNOWN)
[View Structural Homologs]
STP B11_contig_214 B11_contig_214_1391 1434715 1435311 - SBP_bac_1
TC B11_contig_214 B11_contig_214_1392 1435714 1437135 - 2.A.118.1.8
Gene ID: B11_contig_214_1386
Type: CAZyme
Location: 1430478 - 1431647 (-)
Gene ID: B11_contig_214_1387
Type: TF
Location: 1431647 - 1432471 (-)
Gene ID: B11_contig_214_1388
Type: TC
Location: 1432495 - 1433325 (-)
Gene ID: B11_contig_214_1389
Type: TC
Location: 1433330 - 1434229 (-)
Gene ID: B11_contig_214_1390
Type:
Location: 1434246 - 1434707 (-)
Gene ID: B11_contig_214_1391
Type: STP
Location: 1434715 - 1435311 (-)
Gene ID: B11_contig_214_1392
Type: TC
Location: 1435714 - 1437135 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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