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Cluster: B11.bin_3_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme B11_contig_582 B11_contig_582_1000 1023668 1024582 - GT2
pfam B11_contig_582 B11_contig_582_1001 1024650 1025837 - LytR_cpsA_psr
TC B11_contig_582 B11_contig_582_1002 1025856 1027253 - 9.B.18.1.1
CAZyme B11_contig_582 B11_contig_582_1003 1027353 1028309 - GT2
CAZyme B11_contig_582 B11_contig_582_1004 1028316 1030151 - GT2 | GT2
peptidase B11_contig_582 B11_contig_582_1005 1030290 1031549 + S11.UPW
CAZyme B11_contig_582 B11_contig_582_1006 1031696 1033903 - GT4 | GT4
CAZyme B11_contig_582 B11_contig_582_1007 1033914 1035653 - GT2
NULL(UNKNOWN) B11_contig_582 B11_contig_582_1008 1035701 1036309 - NULL(UNKNOWN)
[View Structural Homologs]
TC B11_contig_582 B11_contig_582_1009 1036323 1037057 - 3.A.1.103.1
TC B11_contig_582 B11_contig_582_1010 1037071 1037847 - 3.A.1.103.6
Gene ID: B11_contig_582_1000
Type: CAZyme
Location: 1023668 - 1024582 (-)
Gene ID: B11_contig_582_1001
Type: pfam
Location: 1024650 - 1025837 (-)
Gene ID: B11_contig_582_1002
Type: TC
Location: 1025856 - 1027253 (-)
Gene ID: B11_contig_582_1003
Type: CAZyme
Location: 1027353 - 1028309 (-)
Gene ID: B11_contig_582_1004
Type: CAZyme
Location: 1028316 - 1030151 (-)
Gene ID: B11_contig_582_1005
Type: peptidase
Location: 1030290 - 1031549 (+)
Gene ID: B11_contig_582_1006
Type: CAZyme
Location: 1031696 - 1033903 (-)
Gene ID: B11_contig_582_1007
Type: CAZyme
Location: 1033914 - 1035653 (-)
Gene ID: B11_contig_582_1008
Type:
Location: 1035701 - 1036309 (-)
Gene ID: B11_contig_582_1009
Type: TC
Location: 1036323 - 1037057 (-)
Gene ID: B11_contig_582_1010
Type: TC
Location: 1037071 - 1037847 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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