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Cluster: B11.bin_2_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_558 659144 660574 + 9.B.18.1.3
NULL(UNKNOWN) B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_559 660558 661730 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_560 661730 663007 + Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_561 662988 663968 + GT2
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_562 664105 665022 + GT2
TC B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_563 665034 666503 + 2.A.66.2.16
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_564 666503 668266 + GT2
NULL(UNKNOWN) B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_565 668277 669470 + NULL(UNKNOWN)
[View Structural Homologs]
pfam B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_566 669891 670895 + GHMP_kinases_N | GHMP_kinases_C
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_567 670956 671696 + GT26
CAZyme B11_scaffold_167_corr_3_np12 B11_scaffold_167_corr_3_np12_568 671693 672709 + GT4
Gene ID: B11_scaffold_167_corr_3_np12_558
Type: TC
Location: 659144 - 660574 (+)
Gene ID: B11_scaffold_167_corr_3_np12_559
Type:
Location: 660558 - 661730 (+)
Gene ID: B11_scaffold_167_corr_3_np12_560
Type: pfam
Location: 661730 - 663007 (+)
Gene ID: B11_scaffold_167_corr_3_np12_561
Type: CAZyme
Location: 662988 - 663968 (+)
Gene ID: B11_scaffold_167_corr_3_np12_562
Type: CAZyme
Location: 664105 - 665022 (+)
Gene ID: B11_scaffold_167_corr_3_np12_563
Type: TC
Location: 665034 - 666503 (+)
Gene ID: B11_scaffold_167_corr_3_np12_564
Type: CAZyme
Location: 666503 - 668266 (+)
Gene ID: B11_scaffold_167_corr_3_np12_565
Type:
Location: 668277 - 669470 (+)
Gene ID: B11_scaffold_167_corr_3_np12_566
Type: pfam
Location: 669891 - 670895 (+)
Gene ID: B11_scaffold_167_corr_3_np12_567
Type: CAZyme
Location: 670956 - 671696 (+)
Gene ID: B11_scaffold_167_corr_3_np12_568
Type: CAZyme
Location: 671693 - 672709 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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